| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3051 |
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| Symbol | flhF |
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| ID | 5612529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3686638 |
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| End bp | 3688032 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933988 |
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| Product | flagellar biosynthesis regulator FlhF |
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| Protein accession | YP_001474783 |
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| Protein GI | 157376183 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1419] Flagellar GTP-binding protein |
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| TIGRFAM ID | [TIGR03499] flagellar biosynthetic protein FlhF |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.03242 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGATTA AACGATTTTT AGCAAAAGAT ATGCGCACAG CTCTCGCCCA GGTTAAAGAG
ACCTTAGGTT CAGATGCCGT GATTATGTCC AACAAGAAAG TGACGGGTGG CATAGAGATA
GTGGCGGCTG TCGATTACGA CGAGCCTAAG CCCAAATTGC AGCAAGCTGC AAATGCTGCT
CCCACGTCAT CATTTCTGGA TCTGGCAGAA GAGAAAATTT CTCTTGGGTC AAAAAGACCC
GTTCGGACGG AATCAAAAAT TAAGCCGGCT CCTGCCGCTG ATTCATTGCA AGCCCTGTTA
GAGAGACAAC AGAGTCGTGT TAACCAGCAG GTCGGTCACA AATCTGATGA GCTGGATATG
CCCGAGTGGG CAAAAGGGTT ACAAGCTCCA TCTGTTAATG CGAGAGTAGC CGAACCCGAA
GCAAAGCCAT TTAGTGGTCG AAGCGGGCAT GAATCTAAAG TTAAACCGAA TCAAGAGTTT
GATGCGATGC GTGAAGAGTT AGCCTCTCTG CGTAATTTAT TGACTCATCA GGTGACGTCG
TTACTGACGG AGCAAAAGAG TCGGGTTAAT CCTGTCGGTG CCATGTTAGA AAGTAAATTG
CTGGATGCCG AGTTTTCACC GGCAGTGGCA ACAAAGCTTT CCGATTTGAG TGAACATTAT
ACTCCGGCCG AACTCGTCAG AACTTTGCCG CGCAGTTTGG CCAATATGTT AGATAATCAA
GGTGATGATA TCGTTCGTCA GGGTGGTGTC GTCGCATTTG TTGGCCCTAC AGGGGTCGGC
AAAACAACAA CTGTTGCAAA ATTAGCCGCC AGATATGTTG CACACCATGG TGCAGATCAA
GTTGCATTGA TTACAACCGA TCATTATCGC ATAGGAGCCT TTGAGCAATT GGCTACCTAT
GGCAAAATAA TGGGGTGTCC GGTAAAGCAG GCACACGATC TCAGTGAGTT GGAACAAATT
CTTTATCAGT TCAGGAATCG CAAGCTAGTA TTGATAGATA CGGCGGGTAT GGGTCAACGA
GATATCAGGC TTTTCCAACA ACTTGATAAT TTAGCTGCAA ATAGCAGAAT ACCTATACGC
AGTTATCTGG TACTGTCTTC TACAGGGCAG AGAAGGGTCT TAGAGGACGC CGTAGCGCAG
TTTAAACGTA TTCCGCTATC GGGAGCCGTG TTGACTAAGC TCGACGAATC AATTTCTTTA
GCTCCAGCAT TGAGCGTATT GATACAAAGT GGGTTACCAT TAAGTTATGT AACTGACGGG
CAAAGAGTTC CAGAAGATAT GCAAGTTGCT GATACCTTAG CTTTAGCCAA TAAAGCGTTA
TCGGTATTAG ATAAGAAAGA ACACTTAGTA CAGAACAATG AACGGTCAGA TGAAAGGGCC
TATGCATTTG AGTAA
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| Protein sequence | MKIKRFLAKD MRTALAQVKE TLGSDAVIMS NKKVTGGIEI VAAVDYDEPK PKLQQAANAA
PTSSFLDLAE EKISLGSKRP VRTESKIKPA PAADSLQALL ERQQSRVNQQ VGHKSDELDM
PEWAKGLQAP SVNARVAEPE AKPFSGRSGH ESKVKPNQEF DAMREELASL RNLLTHQVTS
LLTEQKSRVN PVGAMLESKL LDAEFSPAVA TKLSDLSEHY TPAELVRTLP RSLANMLDNQ
GDDIVRQGGV VAFVGPTGVG KTTTVAKLAA RYVAHHGADQ VALITTDHYR IGAFEQLATY
GKIMGCPVKQ AHDLSELEQI LYQFRNRKLV LIDTAGMGQR DIRLFQQLDN LAANSRIPIR
SYLVLSSTGQ RRVLEDAVAQ FKRIPLSGAV LTKLDESISL APALSVLIQS GLPLSYVTDG
QRVPEDMQVA DTLALANKAL SVLDKKEHLV QNNERSDERA YAFE
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