Gene Ssed_3035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_3035 
Symbol 
ID5613367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3669088 
End bp3669417 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content42% 
IMG OID640933972 
ProductS23 ribosomal 
Protein accessionYP_001474767 
Protein GI157376167 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.964559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00587494 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGTATTAC TCTTTGAATG TAGTCGTGAT CGTGGTTTTA AGGACCAAGT CACCAGAGCC 
GCTCTTTCTA TCCCATCCAA TATTGCAGAA GGGGAGGAGA GAGGCACACC TAAAGATTCT
GCAAGATTCC TCTATTATTC CAAAGGTTCA GCCGGAGAGT TGGTTACACA GCTATATATC
GCCATTGAAA TAGGTTTAGT CGATAAAACT AAAGCATTAC AGCTGATAGA TGAAACCAAA
CAGTTATCCG CAATGTTGGC TGCTTTGATC AAAATACGCA AAGGTGAAGT GTATGAATGC
CCTGCAGGAT ATCAGGCTAA GGAAGACTGA
 
Protein sequence
MVLLFECSRD RGFKDQVTRA ALSIPSNIAE GEERGTPKDS ARFLYYSKGS AGELVTQLYI 
AIEIGLVDKT KALQLIDETK QLSAMLAALI KIRKGEVYEC PAGYQAKED