| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2992 |
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| Symbol | |
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| ID | 5610504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3623739 |
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| End bp | 3624737 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640933932 |
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| Product | glycosyltransferase-like protein |
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| Protein accession | YP_001474727 |
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| Protein GI | 157376127 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.151276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTGATA TATTGACTGC AAACAATGAG ATTTTAATAT TAATGGCAAC TTTTAATGGG
GCGAAATTCA TTCAAGAGCA AGTCGAAAGT ATTCAAAATC AAACATTAAC TCGATGGACG
TTGGTTATTA GAGATGATGG TTCAACTGAT GAGACAATTA CACTTTTAAA AGATTATATT
GAGAAAGATA AACGAATTTA TTTGTTGAAA GATAGCTTAG GGGCGACAGG TAGTGCACAG
GGTAATTTTT GTTGCTTGCT TGACTTTGCA CAAAAAACAA GCTCAGAGTA TATTTTTTTT
AGTGATCAAG ACGATGTTTG GCTCTCCAAC AAACTTGAGA GTTTTATAAG TGAGGCGAAA
AGGTTAAGTG CTTGCAACTC ATCACCTTTA TTAGTGCATT CAGATTTACG AATTGTTGAT
CAAAACTTGA AATTAATAGC TCCTTCATTT GTAAGCTCTG TTCGTTTGTC TCCATTAAAA
AATAATACCG TTAAGTCTTT TGCTTTCCAG AATAGTGTCA CAGGTTGTGC CTGTATGATC
AACAGAGCCT TATTAAACAA AGTAACACCT GCACCCAAAA GTGTTTTAAT GCATGATTGG
TGGTTAGCAT TGGTTGCTAG CAGTGTAGGA ACTATTACTT TTATGCCTGA AGTCACGGTG
AAATACAGGC AACATACCGG TAATGCTGTT GGTGCGATCT CTTACTTAAC TTTGTGTAAC
CCTTTTTCAA ATCTAAGTTG GAATATGATA AGAGAAGGCC GTAAATTTAT TGAGGGCAGT
TACCTACAAA TTGTTAATTT ACGTGAGCGA TTGCTCGTTG GAGGTTATGA CACATCTGAA
GCTGATATAT TATTGGCGTC AGCTAGATTG AATCGTTTTC ACCGTATTGT GTATCTGAAA
AAGCATGGTT TTTTGCCAGT AGATAAAGGT AGAATAACAG GATTTATTAT AAGGCACTTA
CTAACCCCTC GAAGCGATAT TAAAAAATAT GCAAGGTAA
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| Protein sequence | MIDILTANNE ILILMATFNG AKFIQEQVES IQNQTLTRWT LVIRDDGSTD ETITLLKDYI
EKDKRIYLLK DSLGATGSAQ GNFCCLLDFA QKTSSEYIFF SDQDDVWLSN KLESFISEAK
RLSACNSSPL LVHSDLRIVD QNLKLIAPSF VSSVRLSPLK NNTVKSFAFQ NSVTGCACMI
NRALLNKVTP APKSVLMHDW WLALVASSVG TITFMPEVTV KYRQHTGNAV GAISYLTLCN
PFSNLSWNMI REGRKFIEGS YLQIVNLRER LLVGGYDTSE ADILLASARL NRFHRIVYLK
KHGFLPVDKG RITGFIIRHL LTPRSDIKKY AR
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