| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2983 |
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| Symbol | |
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| ID | 5610538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3612206 |
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| End bp | 3613489 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640933923 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001474718 |
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| Protein GI | 157376118 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTTCCG GAGTGCTCAA CAATGCAAGT TGGCTTCTGC TCGAAAAAGG CTTGCTATTA
GGCAGTGGCT TTCTATTTAC TATCGTTTTA ACACGGTATT GGTCTGTGTC GGAGTTAGGG
GATTACCAGT ACCTGTTAGC TTTAGTGGCG CTTCTGGTTC CATTTTCTAA TCTTGGGTTA
AACTCACTGG TGAGTCGAGA GCTCGTGACC AGAGCCGAGC ATACCGATGT GATTATGGGG
ACGGCTGTTG TTCTCAGGTT GCTAGGGGCG CTACTCGGCG GGGTCATATT TAGTCTACTA
TCGATTTGGT TGGTAGCTCC CACCCTACAA CCTCTATTTT TCGTCTTGTT ATTCGCGCAA
TTATCCCATG CATTTGGGGT CTTCGATTAC TATTTTGAAG CAAAAGTACA ATCGAGAGTT
TCGGCAATTC TGAGGACCTG TGTAGGCCTT AGTTTTATGG CGGTTAAACT TTCATGTGTA
GTGCAAGGTG CTGACCTTTA TACAGTATTG TTGCTTACCG TCGTAGAATG GGTAGTACTC
AGTTTGATGT GGTTATTGGT ATATCAGCTT TATCACAAGC GTCTCAAAGA GATGTCTTGG
TGCTCTGCCC AAGCTCGAAG ATACCTTAGT CGCTGCGGTT GGCTAATACT CTCCAGTATC
GCTGCAATCG TCTATCTAAA GATTGATCAA GTCATGTTAG GCTCTCTGCA TTCCAGTGAA
TCAGTCGCTT TTTATAGTCT TGCGAGTCGA TTATCTGAGG TCTGGTATCT GGTACCAGGA
ATCGTTGTAG CTTCATTTTA TCCCTCTTTA ATCAAAGCTA AAGAGCAGAA TGAAGACTAC
CAGGGATCAT TGCAGCGTCT ATCTGATAGC CTTTGTTGGG CCGCGATTAC TATTGCGATT
TTGATGAGTG TTATTGCTCC CGTTCTCGTG CCGTTGCTAT TTGGTGATAC TTACCTGCCT
GTAGTTGCCA TATTGCAGAT CCATATCTGG GCGGGCGTGT TTATTTTTAT GAGAGCGTTA
TTTAGTAAGT GGCTCCTCAT TGAGGATCTA CCCAAATATT CTTTGGTTAC CCACGGAAGT
GGCGCCATTA TTAACTTATT ACTGAATAGC CTACTCATAC CTGAGCATGG TGCGTTAGGT
GCAGCTTGGG CTACGCTGGC ATCCTATGCG GTGGCTTCAT ATTTAGGTTT GTTTATTTTT
CCTAAGACCC GCTGTATGGG AGTGTTGATG ACGTACTCCC TATTGGCACC TGTGTGTAGG
TTTAGATTGA GAAAGAGGGG CTAA
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| Protein sequence | MPSGVLNNAS WLLLEKGLLL GSGFLFTIVL TRYWSVSELG DYQYLLALVA LLVPFSNLGL
NSLVSRELVT RAEHTDVIMG TAVVLRLLGA LLGGVIFSLL SIWLVAPTLQ PLFFVLLFAQ
LSHAFGVFDY YFEAKVQSRV SAILRTCVGL SFMAVKLSCV VQGADLYTVL LLTVVEWVVL
SLMWLLVYQL YHKRLKEMSW CSAQARRYLS RCGWLILSSI AAIVYLKIDQ VMLGSLHSSE
SVAFYSLASR LSEVWYLVPG IVVASFYPSL IKAKEQNEDY QGSLQRLSDS LCWAAITIAI
LMSVIAPVLV PLLFGDTYLP VVAILQIHIW AGVFIFMRAL FSKWLLIEDL PKYSLVTHGS
GAIINLLLNS LLIPEHGALG AAWATLASYA VASYLGLFIF PKTRCMGVLM TYSLLAPVCR
FRLRKRG
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