| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2954 |
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| Symbol | |
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| ID | 5610688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3578713 |
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| End bp | 3580023 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640933894 |
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| Product | poly(glycerophosphate) glycerophosphotransferase |
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| Protein accession | YP_001474689 |
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| Protein GI | 157376089 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1887] Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAGG TGATCACATC AATATTAAGA AAAATAATCT ATCACTGCTC TGGTTTCAGC
CCGAGAATGA ATAAGGCGGT ACTGGGTAGT TACAAGGATC AGTTTTCAGA TAATGCCAAG
TATTTATGCC TTCATTGGCA ACAGACCCGC TTTATCCGTG CCATCTGGAT AAGTGGAGAT
GCAAGCCTGA TAAAACAGTT ACGTGAAGAG GGTATTGAAG CCTATCACCG AAGAAGCCTG
CGTGGGCTCT ATCATTGCCT AACCTCAAAA TACTATTTTT ATAACACCTA TATTGGCGAC
ATCAATCAGT ATGTCGCCAA GGGAGCAATA AAAACAAACC TCTGGCATGG CTCACCGCTT
AAGAAAATTG AGTTCGACAT TGAATCAGGG CCGTTAGCTC ACATCTATAA TGCTGCGGGA
CCACTGGATC GAGTACTAAA CTCTCTGAAA TTCCACCAGC AACATATCAC CCCCGATATC
ATGCTGAGCC CGAGTCCGGT TATCGACCCC CTTTTCACAT CGGCTTTCAG AATCACACCG
CAGCAGGTGA TACGAAGTGG TAATCCGAGA ACCGACTATC ACAGACGCTA TCCCAATCAA
AAAAAATCCC TGAAGAGCAT TTTTAATGTG CAGTATGATC AGGTGATCTT GTATGTACCT
ACCTGTCACG ACACCGCGCA GACGCGGGGG AATAATAGCC AGATTAAGAG TCAGGCCTCG
AGCTTGAGCC AGAGCGTGAT GGGTCGCATG AGTCATTACG ATAAAGGCTT CGACTGGCCC
AGACTCTCAA AACAACTGCA GCAGAATAAC CAGCTATTCT TAATTCGCTT TCATCCAAAT
GAAGCCCATC TGGGCAAGCA ACTAAGCCAG TATCCAAATA TCATAGATAT CTCATCCTGG
CAGGATGTTT ACAGCACCTT GCACGAGATA GATCTATTAA TCACCGACCA GTCATCTCTG
TTTATCGACC TGCTTTTATA TCGGGTCCCA ATCCTTTTTT ACCGCTTCAA CCAAGTGGAA
GAATCGACTC AACTCAGAGA AGCTTATGAC TATGCAGAGT GCCTACCTTT AGTCGGCGGG
CTTTCAACAA GCTGTAACTC TTCATCGAAT AGAGCCGTAC ATACATTCCC GGCACTATTG
GAGGTGTTAA ACAAAGAGGA GAGTTTCCAT ATCGACACCG AGACGGAAAA AGAGTATCGA
TTACTTCAGC AAATCTATTG GCAGACTGAG GATAACGATG CCTTCTCGAC AATAGAAAAT
GAAATTATCG GAAGGGATGA ACTAGCTCAG CTTAAATCGA TCCGACAATA G
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| Protein sequence | MMKVITSILR KIIYHCSGFS PRMNKAVLGS YKDQFSDNAK YLCLHWQQTR FIRAIWISGD
ASLIKQLREE GIEAYHRRSL RGLYHCLTSK YYFYNTYIGD INQYVAKGAI KTNLWHGSPL
KKIEFDIESG PLAHIYNAAG PLDRVLNSLK FHQQHITPDI MLSPSPVIDP LFTSAFRITP
QQVIRSGNPR TDYHRRYPNQ KKSLKSIFNV QYDQVILYVP TCHDTAQTRG NNSQIKSQAS
SLSQSVMGRM SHYDKGFDWP RLSKQLQQNN QLFLIRFHPN EAHLGKQLSQ YPNIIDISSW
QDVYSTLHEI DLLITDQSSL FIDLLLYRVP ILFYRFNQVE ESTQLREAYD YAECLPLVGG
LSTSCNSSSN RAVHTFPALL EVLNKEESFH IDTETEKEYR LLQQIYWQTE DNDAFSTIEN
EIIGRDELAQ LKSIRQ
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