| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2934 |
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| Symbol | |
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| ID | 5610904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3550884 |
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| End bp | 3551279 |
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| Gene Length | 396 bp |
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| Protein Length | 131 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640933874 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474669 |
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| Protein GI | 157376069 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1664] Integral membrane protein CcmA involved in cell shape determination |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000305173 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCGGAA AAAAGAAAGC ATCAGGGCTC ACCTTTGTCG CCCCAGGTAC CAAATTATCC
GGTGAAAGCC ATTTTGCCGG AGAGGCGTTA ATCGGTGGTG AGGTCTTCGG TAAGATAAGC
TCAACGGGTA AAATCACGAT CGAAATAGAT GGTTATGTGG ATGGCGAGCT CAACTGTGAC
GAATTAAAAG TTGCGGGACA CTTCAAAGGA AAACTGAAGT GCGGCAAGCT TAACATCACC
AGTACAGGCA CTGTCGAAGG TGAATTGGCT TGCGAATCAA TGGAGATCTT CGAAGGTGGA
CAATTTATCG GTATTCGGGT CAAAGAAGAT ATTGCACTAC TCAATAACTT TGACTCACAA
CAGGCAGAGA TTGAAGGTGA ATTGCAAACG GGCTAA
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| Protein sequence | MFGKKKASGL TFVAPGTKLS GESHFAGEAL IGGEVFGKIS STGKITIEID GYVDGELNCD
ELKVAGHFKG KLKCGKLNIT STGTVEGELA CESMEIFEGG QFIGIRVKED IALLNNFDSQ
QAEIEGELQT G
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