| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2917 |
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| Symbol | |
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| ID | 5609703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3530864 |
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| End bp | 3531520 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640933857 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001474652 |
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| Protein GI | 157376052 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGATA GCAAGAATAA AGTGGGACGT CCCTGCGGAG AGACCCAAAA TCGCGATAAA
CTTATTCAGG CTGCGAGAGC GCTCTTTGTC GAGCGAGACT ATTCTCAGGT CACCATTCGT
GACGTCGCGG CGATTGCAGG CACAGACCCC GGGCTAATTC GCTACTACTT CGGCTCTAAA
GAAAACCTGT TCACCGCTAT GCTCCGAGAA ACTGCGGCGC CCGTGAAACA ACAGCTTTAT
AAGGTGATTA AAGAGAAAAA AGCGAGCGGC CCGGCTAGCT TCATGCAGAC CTACTATCAG
GTGATGTCTG AGTACCCTCA TTTTCCAAGG TTAATCTTCC GCCTGGCGGG TCTCGATCAG
AGCATTCCCG AGAACCAAGA GATAACCAAG GTGTTCAACG AAATCGTCGA TCTGGATGAC
ATCATGATGT TCGATAAGCT CAAAGAGAGA GGGCTGCTCC GGGACGATGT CGATAGCCTG
TGCGCACAAC TGAGTTTTAT TTCGATGACT ATATTCCCAT TTCTTGTACC CGAAGAGTTA
TTGACCAGAC TCGGTGTACA GCTCACACCC GAATTTTTAA CTAAACTCGC AGAGCAAAAT
ACAAATCTGC TTGCAAGGGG CTTGATGCCC GCAAAGGACA AGAGTGATGA CCAGTAA
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| Protein sequence | MPDSKNKVGR PCGETQNRDK LIQAARALFV ERDYSQVTIR DVAAIAGTDP GLIRYYFGSK
ENLFTAMLRE TAAPVKQQLY KVIKEKKASG PASFMQTYYQ VMSEYPHFPR LIFRLAGLDQ
SIPENQEITK VFNEIVDLDD IMMFDKLKER GLLRDDVDSL CAQLSFISMT IFPFLVPEEL
LTRLGVQLTP EFLTKLAEQN TNLLARGLMP AKDKSDDQ
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