| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2906 |
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| Symbol | gltX |
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| ID | 5610569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3513868 |
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| End bp | 3515277 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640933837 |
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| Product | glutamyl-tRNA synthetase |
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| Protein accession | YP_001474641 |
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| Protein GI | 157376041 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases
[TIGR00464] glutamyl-tRNA synthetase, bacterial family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000836575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.409064 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAACTA AGACGCGTTT TGCTCCAAGT CCTACTGGTT TTTTGCATGT CGGTGGCGCT
CGTACAGCGC TTTATTCATG GTTATATGCT CGTGCAAATC AAGGTGAATT CGTTTTACGA
GTAGAAGATA CCGATATTGA GCGTTCGACT CCTGAAGCAT GCGAAGCCAT TCTAGAAGGA
ATGCAGTGGT TAGGTCTGAA TTGGGATGAA GGGCCTTATT ACCAAACCAA GCGTTTTGAT
CGCTACAATG AAATTATTGC TCAGATGTTA GAGCAGGGCA CTGCATATAA GTGTTATTGC
TCACGTGAGC GCATAGAAAC TATGCGTGAT GAGCAGGCTG CTAAAGGTGA ACAGCAGAAG
TATGATGGTT GTTGTCGAGA TAAAGCGCCG CGTGATACAG ATGAACCTTT TGTTATTCGT
TTCAAAAACC CTACAGAGGG TAGTGTAGTA TTTGATGATC ACGTTCGTGG TCGTATCGAA
ATTTCTAATG ACCTTCTGGA TGATTTGATC ATTGCACGTA CTGAAGGTAC GCCGACTTAT
AACTTCTGTG TCGTTGTTGA TGATTGGGAT ATGGGGATCA CTTGTGTCGT ACGAGGTGAA
GACCATATCA ATAATACGCC CCGCCAGATC AACATACTGA AAGCCTTGGG TGCACCAATA
CCTGAATATG CACACGTTGC TATGATCTTA GGTGATGATG GGGCAAAGCT TTCTAAGCGT
CATGGTGCAG TCGGTGTGAT GCAGTATCGT GATGATGGAT ACCTGCCAGA AGCCCTACTT
AACTATCTCG TTCGTCTTGG CTGGTCTCAT GGTGATCAAG AAGTGTTCTC TATAGATGAG
ATGAAGCAGC TATTTAAACT TGATGATATC AATAAAGCGG CTTCAGCATT CAATACCGAA
AAACTGAACT GGTTGAACCA ACACTATATA AAGGAACTGG ATCCTGAGTA TGTTGCTAAG
CATTTAGAAT GGCACATGGC AGATCAAAAA ATTGATACGA GTAATGGTCC TGCTTTATCT
GCAGTTGTCA CAGCTTTATC TGAGCGAGCT AAGACGTTAA AAGAGTTGGC GGCTTCCAGT
CGTTATTTCT ATGAAGACTT TGCAGAGTTC GACGCTACAG CAGCCAAAAA GCATCTTCGT
GGTGTTGCTA TGGAGCCTCT TGAGCTAGTT CAGAAGAAAT TAGCTGAACT TAGTGAGTGG
ACTTTAGAAG GAATTCATCA AGCTATTGAA GATACCGCGA CCGAGTTAGA GGTTGGTATG
GGCAAAGTAG GTATGCCTTT ACGCGTAGCT GTTACCGGTG CCGGTATGTC TCCTGCTGTA
GATTTAACCT TATTCTTGGT TGGAAAGGCC CGTTGTGAGC AAAGAATCTC CAAAGCGATT
GAATTTGTAG CAAATAGAAT AAATTCCTAA
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| Protein sequence | MTTKTRFAPS PTGFLHVGGA RTALYSWLYA RANQGEFVLR VEDTDIERST PEACEAILEG
MQWLGLNWDE GPYYQTKRFD RYNEIIAQML EQGTAYKCYC SRERIETMRD EQAAKGEQQK
YDGCCRDKAP RDTDEPFVIR FKNPTEGSVV FDDHVRGRIE ISNDLLDDLI IARTEGTPTY
NFCVVVDDWD MGITCVVRGE DHINNTPRQI NILKALGAPI PEYAHVAMIL GDDGAKLSKR
HGAVGVMQYR DDGYLPEALL NYLVRLGWSH GDQEVFSIDE MKQLFKLDDI NKAASAFNTE
KLNWLNQHYI KELDPEYVAK HLEWHMADQK IDTSNGPALS AVVTALSERA KTLKELAASS
RYFYEDFAEF DATAAKKHLR GVAMEPLELV QKKLAELSEW TLEGIHQAIE DTATELEVGM
GKVGMPLRVA VTGAGMSPAV DLTLFLVGKA RCEQRISKAI EFVANRINS
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