| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2850 |
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| Symbol | recR |
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| ID | 5612806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3449753 |
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| End bp | 3450352 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640933769 |
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| Product | recombination protein RecR |
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| Protein accession | YP_001474585 |
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| Protein GI | 157375985 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0353] Recombinational DNA repair protein (RecF pathway) |
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| TIGRFAM ID | [TIGR00615] recombination protein RecR |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000709734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000347655 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAATTTA GCCCCCTTGT CGATGAACTG ATCCAGTCAT TGAAATGTCT TCCCGGAGTG
GGTCCCAAGT CAGCACAGCG CATGGCGTTT CAGTTATTGG AACGTGATCG TAAGGCCGGA
CAGACTCTGG CACAGGCTTT AGCTTCAGCG ATGAGCGATG TAGGGCATTG TCGCTCTTGT
CGTACTTTTA CCGAAGAGAG CCATTGCCCG ATTTGTGCCA GTAATAAACG GGGACAGTCT
GAGCAGATCT GTGTCGTGGA GACGCCTGCA GACGTGTTAG CAATCGAAGC GGGCGGTCAT
TTCAGTGGTC GATATTTTGT CCTGTTGGGC CATCTGTCGC CACTCGATGG TGTCGGGCCT
GAAGAGTTAG GGTTATCCCT GCTCGAAGAG CACCTTTGTT CCGGTGGGGT TTCAGAGCTT
ATCTTAGCGA CGAATCCAAC GGTTGAGGGG GATGCCACGG CTCACTTTAT CGCAGATATG
GCTAAAGTTC ACAATGTCTC TGTGAGCCGA ATCGCACATG GTGTGCCCGT TGGGGGCGAG
CTTGAGTACG TGGATAGTAC GACACTGGCA CTCTCTTTTA ATGGACGTCT GCCAATTTAA
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| Protein sequence | MKFSPLVDEL IQSLKCLPGV GPKSAQRMAF QLLERDRKAG QTLAQALASA MSDVGHCRSC
RTFTEESHCP ICASNKRGQS EQICVVETPA DVLAIEAGGH FSGRYFVLLG HLSPLDGVGP
EELGLSLLEE HLCSGGVSEL ILATNPTVEG DATAHFIADM AKVHNVSVSR IAHGVPVGGE
LEYVDSTTLA LSFNGRLPI
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