Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2835 |
Symbol | |
ID | 5613539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 3427828 |
End bp | 3428103 |
Gene Length | 276 bp |
Protein Length | 91 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640933754 |
Product | acylphosphatase |
Protein accession | YP_001474570 |
Protein GI | 157375970 |
COG category | [C] Energy production and conversion |
COG ID | [COG1254] Acylphosphatases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000760642 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000425949 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAGAG TACTGATCAA TGTAAATGGC AAGGTACAAG GGGTATGTTT CAGACGGTTT GCGTTATCTA AAGCTCAAGA GTTGGGTTTG ACTGGCTATG TATCTAATAT CGAGGACGGT TCGGTTAATA TCCTCGCTCA AGGGGCATTT CCGTCCGTAG ACTCTCTAAT CGATTGGTGT CACATCGGCT CTCCACAAGC TCAGGTCACC AGAGTGCTTG TCGAAGAGGA TGAGGCCGAT GAGATCTACC TCGACTTTTC GATTGTACAA TCTTAA
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Protein sequence | MKRVLINVNG KVQGVCFRRF ALSKAQELGL TGYVSNIEDG SVNILAQGAF PSVDSLIDWC HIGSPQAQVT RVLVEEDEAD EIYLDFSIVQ S
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