| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2811 |
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| Symbol | |
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| ID | 5613668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3392632 |
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| End bp | 3393504 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640933730 |
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| Product | succinyl-CoA synthetase, alpha subunit |
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| Protein accession | YP_001474546 |
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| Protein GI | 157375946 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
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| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTATCT TAATCAATAA AGATACTAAA GTTATCTGTC AGGGTTTCAC TGGCGGTCAA
GGTACTTTCC ACTCTGAGCA AGCTATCGAT TATGGTACGC AGATGGTCGG TGGTGTATCA
CCAGGGAAAG GCGGTCAGGT TCACTTAGGT CTTCCGGTAT TTAATACTGT TAAAGATGCC
GTAGCTGAAA CAGGTGCAAC AGCAACTGTT ATCTATGTAC CTGCACCATT TTGTAAAGAT
GCGATTCTTG AAGCGATTGA CGGTGGCATT GAGCTAATCG TTTGTATCAC TGAAGGGATC
CCAACGTTAG ATATGCTTCA GGTTAAAGTT AAGCTTGAAG AGACTGGCGT TCGCATGATC
GGTCCTAACT GTCCGGGTGT TATCACACCG GGTGAGTGTA AGATTGGTAT CATGCCTGGT
CACATCCATA AGCCTGGTAA AGTCGGTATT GTTTCTCGCT CAGGTACGCT TACGTATGAA
GCGGTTAAGC AGACTACTGA TGAAGGTTTC GGTCAGTCTA CTTGTGTAGG TATCGGTGGT
GACCCAATTC CCGGTACTAA CTTCATCGAC GTTTTGGAGA TGTTCCAAAA TGATCCGCTA
ACCGAAGCTA TCGTAATGAT TGGTGAAATT GGTGGTACTG CTGAAGAAGA AGCAGCTGAA
TATATCCAGG CTAACGTGAC TAAGCCTGTT GTTTCATACA TTGCCGGTGT TACAGCACCT
GAAGGTAAGC GTATGGGCCA CGCTGGCGCG ATTATCGCCG GCGGTAAGGG TACGGCTGAA
GACAAGTTTG CCGCTCTTGA AGCCGCAGGT GTGACTACGG TTCGTTCACT TGCTGAAATC
GGTAAAGCGT TACGTACTAA GACGGGTTGG TAA
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| Protein sequence | MSILINKDTK VICQGFTGGQ GTFHSEQAID YGTQMVGGVS PGKGGQVHLG LPVFNTVKDA
VAETGATATV IYVPAPFCKD AILEAIDGGI ELIVCITEGI PTLDMLQVKV KLEETGVRMI
GPNCPGVITP GECKIGIMPG HIHKPGKVGI VSRSGTLTYE AVKQTTDEGF GQSTCVGIGG
DPIPGTNFID VLEMFQNDPL TEAIVMIGEI GGTAEEEAAE YIQANVTKPV VSYIAGVTAP
EGKRMGHAGA IIAGGKGTAE DKFAALEAAG VTTVRSLAEI GKALRTKTGW
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