Gene Ssed_2806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2806 
Symbol 
ID5613641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3389301 
End bp3389792 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content51% 
IMG OID640933725 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001474541 
Protein GI157375941 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTGA CAATCAGACA CACAGAGCCT AATGATTTTG TCGGTATACA GGCCCTTTAT 
GCTCAACCAG GAGCCTATTC GGGCACGCTG CAACTCCCCT ATCCTTCTCA ACAATTGTGG
GAGCAGCGAC TCGCTGAGCC AAATAAAGAC AGTTACAGCC TGGTCGCTGA GGCTAACGGG
ATCATAGTCG GCCAGATTGG CATGCAGCTC ATGAGCTCTC CCCGCCGCAG ACATGTGGGT
AATATCGGAA TGGCTGTCTG CAGCAACCAA CAAAACCAAG GCATTGGCGC TAAACTGTTG
GCGGCTATGG TCGATCTTGC TAACAACTGG CTTTCAGTGA CGCGAATTGA ACTCGAGGTA
TACACGGATA ATGAGGCCGC TATCGCCCTG TATGAGAAGT CCGGCTTTGT GAAGGAGGGG
ACGGCAAAAA ACTATGCATT TCGCGATGGA CAGTATGTCG ACGCCTATCT GATGGCAAGA
GTCTCCAGCT AA
 
Protein sequence
MEVTIRHTEP NDFVGIQALY AQPGAYSGTL QLPYPSQQLW EQRLAEPNKD SYSLVAEANG 
IIVGQIGMQL MSSPRRRHVG NIGMAVCSNQ QNQGIGAKLL AAMVDLANNW LSVTRIELEV
YTDNEAAIAL YEKSGFVKEG TAKNYAFRDG QYVDAYLMAR VSS