Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2792 |
Symbol | |
ID | 5613434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 3366625 |
End bp | 3367230 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640933711 |
Product | ribosomal protein N-acetylase-like protein |
Protein accession | YP_001474527 |
Protein GI | 157375927 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATTAA GGCCAGGGCG GCCTTTTATT GATACAGGCT CACAAGGAGA GGGGATGGAA GCGGAAACAG AAGAATCAAA AATTGAAACA GAAACCGAGC GATTGGTGCT CAGACGGTTC TCTTTAGCCG ATGTTGCCGG TTTTTACGGG CTTAACCTTG ACCCTCATGT GCTTAAATAT ACGGGCGATA AGCCGTTCAG CAGCCCTGAT GAAGTCTCTA AGTTTATTCG GAACTATGAA CAGTATAAAA AGTATGGCTT TGGCCGCTGG TCCCTATATC TGAAAAGCTC CAATGAATAT ATAGGCTTTT GTGGGTTGAG GCGGTCAGCA GAAACCGGTG AGGTGGATAT CGGTTTTAGA CTGATGCAAA GATTCTGGCA TCGGGGCTAT GCGTTCGAGT CAGCCAAAGT TGTATTGGAA TTAGCATTTA CTCGTTATGG CGTCGACAGG GTCATCGCCA GAGCCATGAA GGATAACCAG GCGTCCCATC TGTTGATTCA AAAGCTGGGC ATGCAACTTG ATTCGAGTTT TACTGAGTCG GGTGAGGAGT GGCTGAAATA TGAACTTCAT AAAGATGTTT GGTTGCGATA TTACAGTCTC AAGTGA
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Protein sequence | MPLRPGRPFI DTGSQGEGME AETEESKIET ETERLVLRRF SLADVAGFYG LNLDPHVLKY TGDKPFSSPD EVSKFIRNYE QYKKYGFGRW SLYLKSSNEY IGFCGLRRSA ETGEVDIGFR LMQRFWHRGY AFESAKVVLE LAFTRYGVDR VIARAMKDNQ ASHLLIQKLG MQLDSSFTES GEEWLKYELH KDVWLRYYSL K
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