| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2701 |
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| Symbol | |
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| ID | 5612808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3266051 |
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| End bp | 3267352 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640933620 |
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| Product | anaerobic C4-dicarboxylate transporter |
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| Protein accession | YP_001474436 |
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| Protein GI | 157375836 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
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| TIGRFAM ID | [TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTTTG TTGAATTATT CGTTGTCCTC GCGTTTATCT ATCTTGGAGC CAGAATTGGC
GGAATAGGTA TTGGTCTGGC TGGCGGCGCC GGCGTGCTGG TTCTGTCACT ATTTCTCGGC
GTCGATACCG GCCACATTCC GGTCGATGTG ATTCTTATCA TCATGTCGGT GATTGCAGCC
ATTGCTGCAA TGCAGGTGGC TGGAGGCCTG GAATGGCTGG TCGATCTATC AGAGACCTTC
CTGCGCAAGA ACCCTAAACA TATCACCTTC TATGCCCCTG TCGTGACCTA CTTTATGACG
CTGCTGGCGG GTACCGGCCA TACGGCATTT TCAACACTGC CGGTCATCGC CGAAGTGGCA
AAAGAACAAG GCATCAGGCC ATCGAGACCC CTTGGGATCT CAGTCGTTGC CTCGCAAATC
GCCATTACCG CCTCCCCGAT ATCGGCTGCA GTGGTATTCT TTTCCGGGAT TTTAGAACCC
ATCGGAGTGA GTTACCTGAC GCTGCTGGCT GTCTGCATCC CCACCACCTT CATCGCCTGT
ATGGTCGGGG CTTTCGTCTC TAATTTCTTA GGCTGTGAAT TGAAAGATGA CCCGGTATAT
CAGGCGCGCC TGGAGAAGGG ATTAATTAAA CTGCAGGGCA AAACTCAAAG GGATATTCTC
CCCACGGCCA AACCCGCAAC CTATATTTTT ATCACGGCCA TTATCGGCGT CATTGTTTAC
GCCACCTTAA TCTCAGACAC GGTAAACCTT ATTCCAAACC CATCTCTGGG CCGTAATGAA
GCCATCATGG TATTTATGCT TTCGGCTGCT ACTGCGATTG TGGCATTCAC CAAAATTGAT
GCCTCTGAGA TTGCCAATGC CGCTACCTTC AAGTCCGGTA TGAGTGCCTG CATCTGTGTG
TTAGGTGTCG CCTGGTTGGG AGATACCTTC GTGTCCAGCC ACATTAACGA TATCAAAGCA
CTCTCTGCAG ATGTGCTTAA TCAGTACCCC TGGATGCTGG CGGTGACCCT GTTTTTTGCC
TCTATGCTGC TCTACTCCCA AGGCGCGACC ACTACCGCAT TGATGCCGGC AGCCTTAGCC
ATTGGCGTCG CCCCCATCAC GGCTATCGCC TCATTTGCCG CCGTAAGCGC CCTATTTGTA
TTGCCAACCT ACCCTACACT GTTAGCCGCA GTGCAGATGG ATGATACCGG TTCGACACGC
ATCGGAAATA TGGTATTTAA CCATCCATTC CTGATCCCAG GACTCGTCAC TATATCGACC
TCAGTGGCAT TAGGGTTTGC GTTTGGTGGA ATAATGCTTT AA
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| Protein sequence | MVFVELFVVL AFIYLGARIG GIGIGLAGGA GVLVLSLFLG VDTGHIPVDV ILIIMSVIAA
IAAMQVAGGL EWLVDLSETF LRKNPKHITF YAPVVTYFMT LLAGTGHTAF STLPVIAEVA
KEQGIRPSRP LGISVVASQI AITASPISAA VVFFSGILEP IGVSYLTLLA VCIPTTFIAC
MVGAFVSNFL GCELKDDPVY QARLEKGLIK LQGKTQRDIL PTAKPATYIF ITAIIGVIVY
ATLISDTVNL IPNPSLGRNE AIMVFMLSAA TAIVAFTKID ASEIANAATF KSGMSACICV
LGVAWLGDTF VSSHINDIKA LSADVLNQYP WMLAVTLFFA SMLLYSQGAT TTALMPAALA
IGVAPITAIA SFAAVSALFV LPTYPTLLAA VQMDDTGSTR IGNMVFNHPF LIPGLVTIST
SVALGFAFGG IML
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