| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2698 |
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| Symbol | |
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| ID | 5611764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3261389 |
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| End bp | 3265006 |
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| Gene Length | 3618 bp |
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| Protein Length | 1205 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640933617 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474433 |
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| Protein GI | 157375833 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.737361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGGC AATTATCTCG TGCAAAGCGA CTCACACTGG CTTTCACTCT CATATTACTG
ACTCTCTTCG TCGTCCTGGC GAATACCTAC GAGCAGCTGA CCATCAAGTT GGCAAACCGG
TACCTCGTTG AATATGACAC TCAGATAACC GAGCTCCGCA TCAGGCCTGA TTCACTTAAC
GTTTGGCATT TTCCCCGGTT AACCCTGAAG GTTCACGGCT CTTTGATCGC CATAACAGAT
CTGGTAATTG GCTTAGACAG AGAGTTTTCG CCTTTTCAGC TCTTTACAAA CCAGCTATCG
CTAAACCAGA TAGATAAGAT ATCACTGGCT CAAATGGAGG TTGCGCTCAA TCCGGCCGTG
CTCACCGAGC AGGGGAGAAA CCTGGATGAA CAGGGGCCAA CACTGGCACT AGATCTCAAC
CAGCTGCCTG AGATAGATAT CGGCAAAACC TCATTGACAC TGGTAGGCAT CGACCCGACG
CGGCTGAGTC TTGTCATGGA GAAGCTACGA CTCGATGAGT CTGGGCAGCT CAACACAAGT
TTGAGCCATC AGGGGAATAG GTTATTTAAT TTAAAGGCTA ATTTAACAGA TAAACGTTGG
AAGATATCAA CCAGCTTGGT GTTCGATGAG CTAACCTCAT TCCTGAGCCG ATTATCGACT
CAAGAGATAA ATGATAGTGC ACTCCTCCCC CTACTCAGCC TAAAGCAGCG GATAGAAGAT
GCAAACATCG AACTTAGCGG GAGCCTGAAT TCGACTGTCG ATCTTAACCT GAAAACCGCT
CAACTGAAGT CACATCATGC ACTCACCGGG TCCCAACTCG TCCTTGGCAA CCTGGAATCG
CTGACACTCG AACCACATTC GAGCCTTATA ACAGAAAATG TAACTAAGAA TGCTGAAACG
GCAAAAGAGA GCCCAAAGGG GAACAACAGG GTTAACCTCG AGTTCGAGCT TAATGGACAT
CTTGCCGATC TATCCCTGAG TTTGCTTCCA TTCACCTTGG GCATTGCCCC CAGCCCGGCT
CAGCAAGAGG TCTTGCTCAA TCTCATCCAA GATGATGTTG TTAAGGCTCA AACAAAGCAG
TTCATTCAGG CGTTGACTGC CGATTCATCC CCAGAGATAG AGCTCAGCCT CAAACAACCT
CTCACCTATT CACTGCAAGA TAAGCGAATA AACTTGGATA AGCTTCAGCT CAGTATCGCT
CAATCGAAAA TAGAGGCGAC CATCTCATTA AATGAGGGTT CACTGACTCT GCCCAACCGA
AACAGAGAGG CGAACAGAGA GCAGTTGAGT CTGAATGGGA AATGGCAAAT CGACGCAGAG
CAGCGCCAAG CAGTGTCGAT AAATGAGATC TTAGTTGAAG CCCAGTCCGT CACAGAGAAG
TCCATTGCAG ATAAGCCCAT TGCAGATAAG CCCTTCGCAG AGAGCTCCAT TGCAGATATT
ACGCTGGGAG CCGCTTCACT GGCACTCGAA GGGAGTTTCG CCATAATTGC AAATAATGCC
CTCAATAATA CCCTTAATAA TCCTCTTAAT AAGGTAATGC CCTCGCCTTT CTCCATTGAA
CTTAAGGTCG ATAAAAATGC GCTAATTAAC GCCCGTCAGT TAATGGTGAA GCAGCAACAG
AGTTCGCCAC CTGGCCAAGC CGAGTCCGAT TTTTCCTTCA GCAATCAAAT GGCTCAGCTT
ACTCTACAAG ACGAACTTTC TCTGAGTTAC GACGAAACGG GTCTAGTCGA TATAGCGCTG
CCTAAGCTGA CCATAAACCT GGGGCCGCTC TCTTACCGTC ACCTTCGCCC CTCTTATAAG
TCTAAAACTA TCGAATTTGA TGCTAAAGCG CTTACCTTCA GCTCATCGGG GCCGAGTCAT
ATCAAAGTTG ACCTCGATAT AGATAGTAAT AGAAACAGTG ACAAGCCTGA CGCGAACTTC
GAGTTTACCG GCGCTCCCTT CACACTGAGC TCCTCATCCA TCCGCTACGC GGACCTTAAC
CAGGATGGTA AAGATAACAG TAGCGATAGC CTGATCACCA CCGAACAGAT TCAATTTAAG
AGCCAGGGCG ATACACGATT AACGCTCAGC AATCGTCAAA ACCAAGGGCC GCTCGATAAT
AAAAGCAGCA AGGCGCTCGA GGTTTCGCTC CCCAGACTAT CACTGGAGCA AACACAAACA
GAATTGAGCC ACAAACCCTT TCCCACGAGC TCAGAGGATC ACTATTTTCT CTCCCTGCCT
CGTTTTGTCA TTCAATTGGA AAAACCAAGC TCGGCGTCGG TTGAGCTTGC CTCTCACTCT
GAATCAGTTG AAGCAGAGCC TATAGCCGCC TCAGAGCCAA GTGATGAGTC AGAGTTCGAA
CGATTTTTAA AAACGTCACA AATAGAGAAT AGGCTCAGCT ATGAAATCGA TGGGCTGGAA
ATTAATCACA CCTATATTAA AAATAAGCGT AAAAGAAAAC AGAAGCTACT GCACCTCTAT
CAGGCAACCC TGACGCAGGC ACTACAGTGG GATGACTATC GCCTCGATAC GGTAGAGCAC
TGGTCAATCG ATGGTCTGGA GTTTGAGAGT GAACACAGCC TGAGCCCCGG CGTTGAAAAC
CAAGCTCTAT TGCAGGGAAA ACTGGATCTG GATACCGATC TCAGCACACT CCTCTTCCTG
GTTAAAAATA GCTACGCCTT GCCAACCAAT ATTTATATGG ACGGACAGAC TCAGCTAAAG
GCAAATTATC AATTATTTCA AGAAAGTAGA AACACTCAAT TCAACATTGA TTTTTCACCA
CAACTTTCAT CTCTAAACGG CAGTATTAGC GACCTTCCCT TCGAAGGTGT CGATATCTCT
GCCCGTTGTC ACATCAATCT TAAACAAGAT AGCAATGGCT CGAACAGGAG CACCTTTGCC
TGTCCGGAGA TGGATCTCGC TGCCGCGGCA TTTAATCCAG GGGTGTTAAT CACTAACCTC
AAAGCCGAAG GGGATATCTC TCTCTCACGT GATGATGCTC GACTCGAGGT GCCACTCCTG
ACACCATCAG ACGGTGAGCC ATTACGTCAC GATACCCAGG TCAGTAATAG TGTGGCAGCT
AACTTAAGTG ATGCCGAAAT TCATCTTAAT GCCACAGGTG ATCTCCTGGG AGGCCAGATT
TTGCTGCCAG AATTCAGCCT GAAACTGCAT GACAGATCCC ACGGTTACCT GGTGTTGCAG
GGCCTGAATT TAGAGGAGCT CATCGCCATC CAACCTCAGG TGGGACTCTA TGCTGATGGG
ATATTCGATG GCGTACTGCC GGTAGATCTT ATTGACGGCA GAGTCTCGGT CACAGGGGGA
CGATTAGCGG CGCGAGCACC GGGGGGGCTT ATCTCGGTGA GTGGCAATCC GGCGGTCGAG
CAGATGAGGC TGTCTCAACC CTATCTCGAC TTTGCATTTT CGACCATGGA ACATCTTCAA
TATACTGAAT TGGCGAGCAC CTTCGATATG GAGCCCTCTG GCGATGCCCT GCTTAAGGTC
AATGTAAAAG GCAGAGGAAA AGGAATTGAA CGACCTATTC ACTTGAACTA CTCTCAAGAG
GAGAACATGC TCCAACTGTT AAAGAGCCTG CAAGTGGGTG ATAAACTGCA GACTCAAATT
GAAAAATCGA TGAACTAA
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| Protein sequence | MLRQLSRAKR LTLAFTLILL TLFVVLANTY EQLTIKLANR YLVEYDTQIT ELRIRPDSLN
VWHFPRLTLK VHGSLIAITD LVIGLDREFS PFQLFTNQLS LNQIDKISLA QMEVALNPAV
LTEQGRNLDE QGPTLALDLN QLPEIDIGKT SLTLVGIDPT RLSLVMEKLR LDESGQLNTS
LSHQGNRLFN LKANLTDKRW KISTSLVFDE LTSFLSRLST QEINDSALLP LLSLKQRIED
ANIELSGSLN STVDLNLKTA QLKSHHALTG SQLVLGNLES LTLEPHSSLI TENVTKNAET
AKESPKGNNR VNLEFELNGH LADLSLSLLP FTLGIAPSPA QQEVLLNLIQ DDVVKAQTKQ
FIQALTADSS PEIELSLKQP LTYSLQDKRI NLDKLQLSIA QSKIEATISL NEGSLTLPNR
NREANREQLS LNGKWQIDAE QRQAVSINEI LVEAQSVTEK SIADKPIADK PFAESSIADI
TLGAASLALE GSFAIIANNA LNNTLNNPLN KVMPSPFSIE LKVDKNALIN ARQLMVKQQQ
SSPPGQAESD FSFSNQMAQL TLQDELSLSY DETGLVDIAL PKLTINLGPL SYRHLRPSYK
SKTIEFDAKA LTFSSSGPSH IKVDLDIDSN RNSDKPDANF EFTGAPFTLS SSSIRYADLN
QDGKDNSSDS LITTEQIQFK SQGDTRLTLS NRQNQGPLDN KSSKALEVSL PRLSLEQTQT
ELSHKPFPTS SEDHYFLSLP RFVIQLEKPS SASVELASHS ESVEAEPIAA SEPSDESEFE
RFLKTSQIEN RLSYEIDGLE INHTYIKNKR KRKQKLLHLY QATLTQALQW DDYRLDTVEH
WSIDGLEFES EHSLSPGVEN QALLQGKLDL DTDLSTLLFL VKNSYALPTN IYMDGQTQLK
ANYQLFQESR NTQFNIDFSP QLSSLNGSIS DLPFEGVDIS ARCHINLKQD SNGSNRSTFA
CPEMDLAAAA FNPGVLITNL KAEGDISLSR DDARLEVPLL TPSDGEPLRH DTQVSNSVAA
NLSDAEIHLN ATGDLLGGQI LLPEFSLKLH DRSHGYLVLQ GLNLEELIAI QPQVGLYADG
IFDGVLPVDL IDGRVSVTGG RLAARAPGGL ISVSGNPAVE QMRLSQPYLD FAFSTMEHLQ
YTELASTFDM EPSGDALLKV NVKGRGKGIE RPIHLNYSQE ENMLQLLKSL QVGDKLQTQI
EKSMN
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