| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2695 |
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| Symbol | |
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| ID | 5611783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3256489 |
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| End bp | 3257793 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640933614 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474430 |
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| Protein GI | 157375830 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5438] Predicted multitransmembrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTTCGTC TGGCATTATC GATATTTACT GGTGTGTTAA ACTGCCTCAA GATGATTATT
TTTGCTAACT GTCGTTACAA ACAAGCTATG TTAAAAAACT ATCGATTTAC CCTGTTTATC
GCGCTAATTT CGACATTGAT TTTCTACTTC TCTCCCAGTT TGAGCGATAG TCTAAAACCT
AAGACGCCGC TGCAGCAAGA GTTTGTAGAG GCTCGTGTCG TCGATGTCAT CTCAAATCAT
CTGGCTCCCG ATGCCAGAGT CCCCTCCATA TTAACCGGCA AGCAGGTATT CACCGCCGAG
ATATTAGAGG GAGAAGAAAT CGGTAAAGTG GTCGAAGTAC AAAATCCTCT TAGCCGACAA
CATAATGTAC TGGTCGGCAA AGGCGATATC TTCATCATGA TGATCAGAGA TACGTCTAAT
GGCACTGTGT ATTGGGCCTA TAACCACAAG CGCTCGACGG CCATCTACTG GATGTGTTTT
GCCTTCCTGT TGTTGCTGCT CTCTTTCGGT AAGAAGGAGG GACTGAATTC GGTTATCTCA
CTCTACTTTA CCGCGGCGCT CATCATTGGC GTCTTGATCC CGGCAATTTT TGCCGGTTGG
AACCCGGTGC TGGTCACCAT TGTCCTTATG GGATTAAAGA TTGTCGTCAA TTTTATTCTG
GTATCGGGTT ATAACAAAAA GAGCTTCTGT GCCATGGGGG GCACCCTGCT CGGCGTTATC
GCGGCAGGCA TCATGGCGCA AGTATTTGGT GAGTTTGCGC ACCTTTCCGG CATCTACTTA
GATAAGGGCG AAGACGTTAT CTACCTGGCC ACTCAACCAA TTCAGATCCG CTGGTTGATG
TTTGTTGCCA TCATGGTCTC GGCGCTTGGC GCTGTAATGG ATGTTGCCAT ATCAATTGCA
TCGGCCTATA ACGAGCTTAA AATTACCGAT CCTAAGCTTA GCCCGAGGCA GTTGATGAAG
GCGAGTATGA ATATCGGGCG TGATATCATG GGCACCATGA CTAACACTCT GATATTAGCG
TTTGCCGGTA GCTCTTTAAC CACGATCATG ATGGTTTGGG GACTGGATAT GCCGCTGACT
CAATTTATCA ATACCCCAGT AATCGCCTTG AGTATCATCC ACGCTCTTGC AGGAAGTGTC
GGCATCGTAC TGACCATCCC TCTTACAGCT TGGCTCGCAA GGTACATGCT CAATGATCAA
GAGGGCGTTA CCGAAGCACC TAAAGTCGCT TCAGAACAGT CTGAGACAGC TCAGCCAATC
ACAGTACCGT CTGTTACTGT AAAAGTTCAA GCGTTAGAGT CTTAA
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| Protein sequence | MVRLALSIFT GVLNCLKMII FANCRYKQAM LKNYRFTLFI ALISTLIFYF SPSLSDSLKP
KTPLQQEFVE ARVVDVISNH LAPDARVPSI LTGKQVFTAE ILEGEEIGKV VEVQNPLSRQ
HNVLVGKGDI FIMMIRDTSN GTVYWAYNHK RSTAIYWMCF AFLLLLLSFG KKEGLNSVIS
LYFTAALIIG VLIPAIFAGW NPVLVTIVLM GLKIVVNFIL VSGYNKKSFC AMGGTLLGVI
AAGIMAQVFG EFAHLSGIYL DKGEDVIYLA TQPIQIRWLM FVAIMVSALG AVMDVAISIA
SAYNELKITD PKLSPRQLMK ASMNIGRDIM GTMTNTLILA FAGSSLTTIM MVWGLDMPLT
QFINTPVIAL SIIHALAGSV GIVLTIPLTA WLARYMLNDQ EGVTEAPKVA SEQSETAQPI
TVPSVTVKVQ ALES
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