| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2689 |
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| Symbol | |
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| ID | 5611836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3245349 |
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| End bp | 3247097 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640933608 |
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| Product | gamma-glutamyltransferase |
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| Protein accession | YP_001474424 |
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| Protein GI | 157375824 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0405] Gamma-glutamyltransferase |
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| TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.516535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.975732 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCGT TAAAGACCCT ATTTGTCGCC ATGTCCATAG CCGTACCTCT GTTCAGTATA
TCTGCAGCAC TGCATGTGCC ATCTATACAG GCGGCTGAAC CTTCAATATA TAGCCATATG
GCCACCGTGC AACCTATATG GGCCGAACAT GGCATGGTCT CGAGCCAGGA AGCCCTGGCG
ACGCGCGCAG GAGTAGAGAT ATTAAAGCAG GGAGGAAACG CGGTAGATGC TGCCGTTGCC
GTGGGATTTA GCCTTGCGGT GACCCTGCCC AGAGCCGGGA ATCTGGGTGG CGGCGGCTTT
ATGATGGTAC ATCTTGCTGA GCCCAACAAG ACTATCGCCA TCGATTATCG GGAGATGGCA
CCCGCTAAGG CTCATAGAGA CATTTTCCTC GATGAAAAAG GCGATCCAGA CTCGCGCTTA
AGTCGCGAAC ATGGCTTAGC CGTTGGTGTA CCAGGCACCG TAATGGGAAT GGAACTGGCT
TTGCAAAAAT ATGGCACCAT GACGATGAAA CAGGTCACGA CGGCAGCAAT TAAAATGGCC
AAAGAGGGTA TAGAAGTGAC GCCAGACCTG TCGACCTCAC TCACGGGCCT GAAGAAGCGC
CTCGCCCAAT GGCCTAGCTC TGCGGAGATA TTTTATAAAG CCGACGGCAG TGATTATCGC
GTCAAGGAGA CACTCAAGCA GCCTGAGTTG GCTCACTCCC TCACCCTTAT CGCCGCACAT
GGCAGCAAGG GCTTTTATCA AGGCGAGACG GCGCAGAAGA TAGTCTCTGC CATACAAGAG
GTTGGCGGGA TTATGACACT CGAGGACCTG AAAAACTATC GGGTTGTCGA GCGTAAACCG
GTGCAAGGCG ATTACCGGGG CTATCAGGTG GTCTCAATGC CCCCCCCTTC ATCGGGCGGC
ATACACATCA TCGAAATGCT CAACATGTTA GAACCGTTTC CTATCGATAA GCTGGGCCAC
AACACCGCGG CCACACTCCA TCTGATGACT GAGTCGATGA AACGTGCCTA TGCGGATCGC
AGTGAGTATC TGGGCGACCC TGATTTTTAT AACGTACCGG TTCAGGCACT GATCAACAAA
GATTACGCCA AGAAACTGTC CAGCCAAATC AAAACCAACA GGGCAACACC CAGCAGCGAT
ATTAAACCTG GCAATTTAGT GCCCTATGAA AGTGATCAAA CCACTCATTA CTCCGTTGTC
GACCAATGGG GCAATGCCGT TTCCAACACC TATACCCTGA ATTTCAGTTA TGGTTCCGGC
CTTGTCGCTA AAGGCACGGG CATACTGCTT AATAATGAGA TGGATGACTT CTCCGCTAAA
CCGGATACAC CGAATGGTTA TGGACTGGTT GGCGGTGAAG CAAACGCGGT CGAAGGAGGT
AAACGCCCAC TGAGCTCCAT GAGCCCGACC ATAGTGATGA AAGATGGCAA GCCATTTATA
GTCACGGGTA GTCCCGGAGG CTCACGGATA ATCACCACCA CGATGCAGGT CATCATGAAT
GTTATCGATC ATGATCTGAA TATTGCCGAG GCAACCGCAG CCCCGCGGGT CCATCATCAA
TGGCTACCCG ACCTCCTCAG AGTCGAGCAG AGTCTCAACA GAGACACCAT AGAACTTCTG
GAAGCCAAAG GGCACAAGGT GAAAGTCAAC AATGCCACAG GTTCGACCCA ATCGATCATG
GTCACAGAGC AAGGTATTTT CGGCGCTTCG GATCCCAGAC GTGCCGGCAG CGAAACGGCA
GGGTATTAA
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| Protein sequence | MRPLKTLFVA MSIAVPLFSI SAALHVPSIQ AAEPSIYSHM ATVQPIWAEH GMVSSQEALA
TRAGVEILKQ GGNAVDAAVA VGFSLAVTLP RAGNLGGGGF MMVHLAEPNK TIAIDYREMA
PAKAHRDIFL DEKGDPDSRL SREHGLAVGV PGTVMGMELA LQKYGTMTMK QVTTAAIKMA
KEGIEVTPDL STSLTGLKKR LAQWPSSAEI FYKADGSDYR VKETLKQPEL AHSLTLIAAH
GSKGFYQGET AQKIVSAIQE VGGIMTLEDL KNYRVVERKP VQGDYRGYQV VSMPPPSSGG
IHIIEMLNML EPFPIDKLGH NTAATLHLMT ESMKRAYADR SEYLGDPDFY NVPVQALINK
DYAKKLSSQI KTNRATPSSD IKPGNLVPYE SDQTTHYSVV DQWGNAVSNT YTLNFSYGSG
LVAKGTGILL NNEMDDFSAK PDTPNGYGLV GGEANAVEGG KRPLSSMSPT IVMKDGKPFI
VTGSPGGSRI ITTTMQVIMN VIDHDLNIAE ATAAPRVHHQ WLPDLLRVEQ SLNRDTIELL
EAKGHKVKVN NATGSTQSIM VTEQGIFGAS DPRRAGSETA GY
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