Gene Ssed_2676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2676 
Symbol 
ID5612241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3233713 
End bp3234072 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content44% 
IMG OID640933595 
Producthypothetical protein 
Protein accessionYP_001474411 
Protein GI157375811 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0208691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.147736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAA CAAATCCATT ACTTACCAGC TTTATCGAAA ACGTAAAAGA ACACCAAGCC 
GTCTGGGGAC TGCAGGATGA AACTGGTGAA GGTTGGGTTG TATGTGACTC TTCTGAATAC
GAAGACACTG ATGTTATGCC GTTATGGTCA ACTGAAGCGC ATGCAAAAGT ACATTGCAGT
GAAGAGTGGG CTAACTACCA GCCAGTCTCT ATCACTCTGG TTGAGTTCCT GGAGTTTTGG
GTGTCAGATC TTAACGACGA TGGCGTACTT ATCGGCACCG ATTGGCAAGC CGAAAAAGAG
TGTTTAGAAA TTGATCCGAT CGTACTTGCT CAGTCTTTGG TTAATATCGA AGAAGAATAA
 
Protein sequence
MTETNPLLTS FIENVKEHQA VWGLQDETGE GWVVCDSSEY EDTDVMPLWS TEAHAKVHCS 
EEWANYQPVS ITLVEFLEFW VSDLNDDGVL IGTDWQAEKE CLEIDPIVLA QSLVNIEEE