| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2673 |
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| Symbol | |
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| ID | 5612215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3230661 |
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| End bp | 3231143 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640933592 |
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| Product | peptidylprolyl isomerase, FKBP-type |
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| Protein accession | YP_001474408 |
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| Protein GI | 157375808 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.001969 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00926725 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCATTA AAAACGATAT GGTTGTTCAG TTTAATTACA CATTACGTGA TGAACAGGGT
GAGGTGTTGG AGACAAATGA AGGTCTCGAT CCTATCGCGT ACCTGCATGG GCATGACAAC
ATGATGCCGG GTGTGGAAGA TGCCATTAAT GGTAAAGAAA CCGGTGAGAA GTTTTCAGTC
ACTTTGCCTG CGGCATTAAC ATACGGCGAG CGTAATGAAG ATAGTGAGCA GCGCGTATCG
GTTAAGCATC TACAAGGCGC AAAGGTTTGG AAGCCTGGGA TGCGTGCGCT GATCAACACA
GATCAGGGAC AGCGTCAGGT GACCATTATT AAAGTGGGTA AGTTTATGGC AACGGTCGAT
ATCAACCATC CGTTAGCGGG TCGTGAATTG ACGTTTGACA TTGAAATTGT CGATGCCCGT
GATGCAACTG ATGAAGAGAA GGCACACGGT CACGCCCATG GTAAAGGCGG TCATCAGCAC
TAA
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| Protein sequence | MSIKNDMVVQ FNYTLRDEQG EVLETNEGLD PIAYLHGHDN MMPGVEDAIN GKETGEKFSV
TLPAALTYGE RNEDSEQRVS VKHLQGAKVW KPGMRALINT DQGQRQVTII KVGKFMATVD
INHPLAGREL TFDIEIVDAR DATDEEKAHG HAHGKGGHQH
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