| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2667 |
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| Symbol | ilvH |
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| ID | 5612338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3224991 |
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| End bp | 3225485 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640933586 |
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| Product | acetolactate synthase 3 regulatory subunit |
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| Protein accession | YP_001474402 |
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| Protein GI | 157375802 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0440] Acetolactate synthase, small (regulatory) subunit |
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| TIGRFAM ID | [TIGR00119] acetolactate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000176129 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000698491 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGCGTCGTA TTATATCTGT ATTACTTGAA AACCAACCTG GTGCACTTTC ACGGGTTGTC
GGGCTTTTTT CTCAGCGCGG CTACAACATC GAAACGTTAA CCGTTGCGCC GACAGATGAC
ATCACGTTAT CTCGTCTGAA TATCTCTTTG GTGGCTGATG AAGCGGCACT CGAACAGATA
GAGAAACAGC TGCATAAGCT TATCGATACC CTCAAGGTTT CAAACATTAC CGAGTCGGAT
CATATTGAGA GAGAGCTAGC CCTGGTTAAA GTAAAAGCCA AAGGCAATAT GCGTGATGAG
ATCAAACGCA CTGCGGAGAT CTTCCGTGGA CAGGTCGTCG ATATTACCGC CGATCTCTAC
ACGGTGCAGC TCACTGGAAC GAGTGAAAAA CTCGATGCCT TTATTACTGC AGTCGGTGAT
GTGACCAAAG TCGTTGAAGT ATCACGCTCA GGCGTTGTAG GCCTCGCTCG CGGTGAGAAG
GCTATGAGAG CCTGA
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| Protein sequence | MRRIISVLLE NQPGALSRVV GLFSQRGYNI ETLTVAPTDD ITLSRLNISL VADEAALEQI
EKQLHKLIDT LKVSNITESD HIERELALVK VKAKGNMRDE IKRTAEIFRG QVVDITADLY
TVQLTGTSEK LDAFITAVGD VTKVVEVSRS GVVGLARGEK AMRA
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