Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2655 |
Symbol | |
ID | 5612600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 3211776 |
End bp | 3212276 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640933574 |
Product | CreA family protein |
Protein accession | YP_001474390 |
Protein GI | 157375790 |
COG category | [S] Function unknown |
COG ID | [COG3045] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.546871 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.237745 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTAT TGACGACACT CGGCAAAATA ACCTCTGCAC TCATTTTGCT GGGAGGCCTG AGTGCCTGCG GCGATGATGT CGGTAAAGTC AGCCTGGGGC TCTTTACCAC TAAAGATGTG ATTATCGACG CCAAACAAGA TCCCAAAATT GCTGGTGTCA CCTGTCATAT CAGCCGTGTC GAAGCCAACC TAAGCTTGGC CGATCCCTCT GACATGAGTA TCTCTTGCAG ACAGACCGGA CCTATCTCGG CGATGGATAT TGCCAATATC GACAGGAGTA AGAATGGCGA GATTGTCTTT AAACAGTCTC TCAGCATCTT GTTTAAGACC CTAAAAGTGC GTCGTATCTA TGATGCAGAT AATCAGACGT TACTCTATCT CTCATATTCG ACCAAAGAGA CCGAGGGCAG CCACAAACAC GCTCTGTCGA CCGTGCCTCT CTATGGCACA GATGCGTGGA TACAATCCGG TGTGCCGATT GAAAAGGTTG AGGCGCTGTA A
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Protein sequence | MKVLTTLGKI TSALILLGGL SACGDDVGKV SLGLFTTKDV IIDAKQDPKI AGVTCHISRV EANLSLADPS DMSISCRQTG PISAMDIANI DRSKNGEIVF KQSLSILFKT LKVRRIYDAD NQTLLYLSYS TKETEGSHKH ALSTVPLYGT DAWIQSGVPI EKVEAL
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