| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2636 |
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| Symbol | |
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| ID | 5613163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3190899 |
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| End bp | 3191804 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640933555 |
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| Product | bifunctional methionine sulfoxide reductase B/A protein |
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| Protein accession | YP_001474371 |
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| Protein GI | 157375771 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0225] Peptide methionine sulfoxide reductase
[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
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| TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase
[TIGR00401] methionine-S-sulfoxide reductase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000411372 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0277902 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAAAC TAACTGAATT TGAACGGTTT GTCATCGAGG ACAGAGGGAC GGAACGACCT
TTTAGTGGCG AATATCACCT GCATGATGCG AAGGGTGTCT ATCTGTGCAA ACGTTGTGAT
GCACCTCTGT ATCTGTCTGA GAGTAAGTTT AATGCCCATT GCGGTTGGCC GGCATTTGAT
GATGAGGTCA AAGGGGCCGT TCAACGAGTT GTTGATAGTG ACGGTATTCG CGTCGAGATC
ATCTGCGCGG CGTGTGGTGG CCATTTAGGT CATGTCTTTG AAGGTGAGTA CTTAACGGAT
AAGAATGTCA GACATTGTGT CAACTCAGTG TCTTTACGTT TTAAGTCGAG CGATGAGATT
AATTTGAAGT CCGAAACGAG TTTGGCGACA TTCGGTGGTG GTTGTTTCTG GTGTATCGAG
GCCATTTATT CTGAACTCAA TGGCGTTAAA GACGTCGTTT CCGGCTACAG CGGCGGTGAT
GCCGAGATGG CTAACTATAA AGATGTCTGT AGTGCGTCGA CAGGCCACGC CGAAGTGGTA
CAGATTAAAT TCGAGCCTGA AACTATCAGC TTCGATGAGC TGTTGGAGGT ATTTTGGATG
AGTCACGATC CAACGACACT CAATCAGCAG GGCAATGACG TGGGTCCGCA ATACCGCTCA
GTAATCTTTG CCCATGATGC GCAGCAAGTG GATAGCGCAA ACCGCATGAT TGAGCGGTTA
ACAGAGGCCA AAGTCTGGGA CAGGCCTATA GTGACAGAGG TCACCGCATT TAAGTCATTT
AATCCAGCTG AGAATTACCA CAAGGATTAT TTTGAGCTTA ATGGCGAGCA GCCATACTGC
CAGATGGTTA TCAAACCTAA GCTCGAAAAA TTCAGACTGG CATTTGCGGA TAAATTAAAG
AAGTGA
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| Protein sequence | MSKLTEFERF VIEDRGTERP FSGEYHLHDA KGVYLCKRCD APLYLSESKF NAHCGWPAFD
DEVKGAVQRV VDSDGIRVEI ICAACGGHLG HVFEGEYLTD KNVRHCVNSV SLRFKSSDEI
NLKSETSLAT FGGGCFWCIE AIYSELNGVK DVVSGYSGGD AEMANYKDVC SASTGHAEVV
QIKFEPETIS FDELLEVFWM SHDPTTLNQQ GNDVGPQYRS VIFAHDAQQV DSANRMIERL
TEAKVWDRPI VTEVTAFKSF NPAENYHKDY FELNGEQPYC QMVIKPKLEK FRLAFADKLK
K
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