Gene Ssed_2635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2635 
Symbol 
ID5613162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3189273 
End bp3190829 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content46% 
IMG OID640933554 
Productsulphate transporter 
Protein accessionYP_001474370 
Protein GI157375770 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0659] Sulfate permease and related transporters (MFS superfamily) 
TIGRFAM ID[TIGR00815] high affinity sulphate transporter 1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.40978e-07 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0190825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGATC TCATTCGTCA CAAAACTTCC AGCAGCAAAG CCGATCTTCT ATCGGGCTTA 
ACTGTGGCAC TTGCACTTAT TCCTGAAGCC GTTGCATTCG CTTTCGTCGC AGGTGTTGAG
CCTATGGTGG GCTTATATGC CGCCTTTATT ATGGGGCTTA TCACTGCGCT TATTGGCGGT
CGTCCAGGTA TGATCTCGGG TGCTACGGGC GCTATGGCTG TTGTTATGGT TGCTTTGGTC
GCTGAACACG GAGTGCAATA CCTCTTTGCC GCAGTCGTTC TGGCCGGCCT CATTCAAGTC
TCCTTTGGTC TACTGAAATT AGGTAAGTTC ATTCGAATCG TTCCTTACCC TGTGATGATC
GGTTTTGTTA ACGGACTGGC GATTGTTATT TTTCTTGCCC AACTTGGGCA ATTTAAGGTA
CCTGACGCGG ATGGTGTATT AACCTGGTTG CCTCAAGGCC AGTTAATGCT GATGATGGGC
CTTGTACTGT TAACGATGGC GATTATTCAG TTTTTACCAA AGCTCACCAC TGCCATCCCC
TCTTCGTTGG CAGCAATCGT GACAGTCACC TTAATGGTCG TGTTTTTAGA GCTTGATACC
CGCACCGTTT TAGATTTCCT GAAATCCATG AGTGGTGATG AAAATGCGAC CATTGCCGGA
AGTCTACCTA GCTTCTCTAT TCCTGCCGTT GCATTTAATC TCGAAACGCT ATACATCATT
CTTCCATACT CTCTGATCTT GGCAGCTGTA GGCTTGATAG AATCTTTGCT TACACTGACC
GTTATCGATG AGATGACAAA CACGCGTGGT AAAGGAAACA AAGAGTGTAT CGGCCAAGGT
GTTGGTAATA TTACCAGTGG CTTCTTTGGT GCCATGGGTG GTTGTGCCAT GATTGGTCAG
TCTATGATTA ACATCAACTC TGGTGGTCGT GGACGTTTAT CTGGTATCAC TGCGGCACTT
GCCCTACTCG CCTTTATCCT TTTCGGTTCT GCACTCATCG AAATGATCCC GTTAGCAGCA
CTCGTCGGTG TGATGTTTAT GGTTGTGCTT GGTACCTTCG AATGGGCCAG CTTTAAGGTG
ATGAGCAAAG TACCTAAACA CGATGCTTTT GTCATCATAC TGGTCACTAT CGTCACCGTA
TTTACTGACT TAGCTTTCGC CGTTTTCGTC GGTGTTATCG TATCTGCCCT GGTTTTTGCC
TGGGAGCATG CGAAGCACAT CAATGTAGAG ATCAGCGAAG ATGCTAATGG TTGGAAAGTA
TACAAGCTTA ATGGACCACT ATTTTTTGGT TCAGCCGCCG AGTTTTTAGA GCTTTTCCAC
TCAAATACCG ATCCTGTCGA TGTGATTGTT GATTTCCAAA ATTCTCGGGT ATGTGATCAC
TCGGCACTGG ATGCCATCGA TACCCTTGCA GAGCGCTATG GTTCAAACGG TAAAAAACTG
CACCTACGCC ATCTCAGTAA TGACTGTAAG AAGTTACTAC ACAAGGCAGG CGATCTGGTT
GAAGTTAACC TTATCGAAGA TCCTCACTAC AAAATTGCCG ACGATAAATT AGATTAA
 
Protein sequence
MFDLIRHKTS SSKADLLSGL TVALALIPEA VAFAFVAGVE PMVGLYAAFI MGLITALIGG 
RPGMISGATG AMAVVMVALV AEHGVQYLFA AVVLAGLIQV SFGLLKLGKF IRIVPYPVMI
GFVNGLAIVI FLAQLGQFKV PDADGVLTWL PQGQLMLMMG LVLLTMAIIQ FLPKLTTAIP
SSLAAIVTVT LMVVFLELDT RTVLDFLKSM SGDENATIAG SLPSFSIPAV AFNLETLYII
LPYSLILAAV GLIESLLTLT VIDEMTNTRG KGNKECIGQG VGNITSGFFG AMGGCAMIGQ
SMININSGGR GRLSGITAAL ALLAFILFGS ALIEMIPLAA LVGVMFMVVL GTFEWASFKV
MSKVPKHDAF VIILVTIVTV FTDLAFAVFV GVIVSALVFA WEHAKHINVE ISEDANGWKV
YKLNGPLFFG SAAEFLELFH SNTDPVDVIV DFQNSRVCDH SALDAIDTLA ERYGSNGKKL
HLRHLSNDCK KLLHKAGDLV EVNLIEDPHY KIADDKLD