Gene Ssed_2630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2630 
Symbol 
ID5613615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3181104 
End bp3181694 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content44% 
IMG OID640933549 
Productmaf protein 
Protein accessionYP_001474365 
Protein GI157375765 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0424] Nucleotide-binding protein implicated in inhibition of septum formation 
TIGRFAM ID[TIGR00172] MAF protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000394962 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000875117 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCATCTC AGATTATTTT AGCTTCAACA TCATCATATC GGAAAGAGAT ACTATCTAAG 
CTAGGCATTC CTTTTTGTAC TTGCTCACCA GATATTGATG AAACTCCGCT CAAACAAGAG
ACGCCGGAAG CACATGTTGT TCGACTCGCT AAGGATAAAG CCCGCGTTGG TGCAGACTTA
TTTACACAAG GTCTTGTGAT TGGCTCCGAT CAGGTTGCCG TGATCAATGG CGAGATTGTC
GGCAAACCGA TAAATCATGA GGCCGCAGTA TCTCAGTTAA CTGCAGCGTC CAATCAAGTG
ATCACCTTCT ATACGGGTAT TGCACTTCAC AATATCACCA CCGGTGAGTG CGAAGCCCAC
TGTGAAACAT TTCGGGTTCA TTTTAGAGCA TTAACCACAG CGCAAATAGA ATACTACCTG
AAGAAAGAGC AGCCATATTT CTGCGCTGGT AGCTTTAAAA GTGAAGGCTT AGGTATTGCC
TTGTTTAATC AATTAGAGGG GAAAGACCCC AACACATTAA TCGGACTCCC CTTGATAACG
CTCATCGATA TGCTTTCTCG TCAAGGTTAT GTGGTCCTGG ACCATCATTA A
 
Protein sequence
MPSQIILAST SSYRKEILSK LGIPFCTCSP DIDETPLKQE TPEAHVVRLA KDKARVGADL 
FTQGLVIGSD QVAVINGEIV GKPINHEAAV SQLTAASNQV ITFYTGIALH NITTGECEAH
CETFRVHFRA LTTAQIEYYL KKEQPYFCAG SFKSEGLGIA LFNQLEGKDP NTLIGLPLIT
LIDMLSRQGY VVLDHH