| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2629 |
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| Symbol | |
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| ID | 5613614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3180242 |
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| End bp | 3180766 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640933548 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474364 |
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| Protein GI | 157375764 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000283088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000164508 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAACAG TAAAGATACC GGTTTCAATT GATCCAATAC GCGCTTCGGC GAGTCAGCTT
TCTTATGAAG GTGTGGTTCC GCATAAGCAA TTAAAACGAT TAAATGAGTT AAGTGCCGGC
GACTGTTCCG ATGTGACAGT GTCGTTGGAA TGTGGCGTAG ATATACAGGG GATAGTCTAC
CTTAAAGGGA AGGCTGTGAC GGAGCTCACT CTGAATTGTC AACGTTGCAT GACGCTATTT
ACCACTGAGG TTACGGTCGA CTTCAACTTC AGTCCCTGTG GGAATGAAGC TGAAATCGAT
GAGCTCCCGG ATGCGTATGA CCCTATTGAG TGTAATGAAA TAGGCGAAGT TCGTCTGCAT
CAATTGATTG AAGATGAATT GATAGTCGCT ATGCCTTTAA TACCAATGCA TGCTAACGAA
AGTTGCAGGC AAGGTAGTCA AGACATAGTA GTAGGCGAGA TCGAACCCGC TCAACAGGAG
CGTCCAAATC CGTTTGCAGT GTTAGAAAAA CTGAAGAGCA AGTAA
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| Protein sequence | MQTVKIPVSI DPIRASASQL SYEGVVPHKQ LKRLNELSAG DCSDVTVSLE CGVDIQGIVY
LKGKAVTELT LNCQRCMTLF TTEVTVDFNF SPCGNEAEID ELPDAYDPIE CNEIGEVRLH
QLIEDELIVA MPLIPMHANE SCRQGSQDIV VGEIEPAQQE RPNPFAVLEK LKSK
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