| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2626 |
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| Symbol | |
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| ID | 5613232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3178039 |
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| End bp | 3178998 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640933545 |
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| Product | 3-oxoacyl-(acyl carrier protein) synthase III |
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| Protein accession | YP_001474361 |
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| Protein GI | 157375761 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
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| TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000124797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000014785 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCATACAA AAATTCTTGG AACTGGTAGC TATCTACCAG CGCAAGTGCG TAGCAATCAA
GATCTGGAAC AGATGGTTGA AACCACTGAT CAGTGGATTG TTGAACGTAC AGGTATTTCA
GAGCGCAGAA TTGCTGCCGC CGATGAGTCC GTTTCTACTA TGGGCTATGA AGCTGCGGTA
AAAGCACTCG AGATGGCAGG TATCGACGCC AATGAACTCG ATATGATCGT GTGTGGCACG
ACGAGCGCCA GTAATGCGTT TCCGGCGGCG GCTTGTGAAA TTCAGGCAAA GCTTGGTGTT
CATACTATTC CTGCGTTTGA TATCGCAGCG GCCTGCTCAG GCTTTGTTTA TGCGCTTTCG
GTCGCCGACC AATTCGTTAA GTCGGGTGCC GCTAAAAAGG TATTAGTGAT CGGTGCGGAT
GTGTTATCCC GACTATGTGA GCCTGAAGAT CGCAGTACCA TTATCCTGTT TGGTGATGGT
GCCGGTGCTG CAGTCGTTGG TGCCTCGAGC GAACCAGGTA TCTTGTCTAC ACATATCTAT
GCCGATGGCA GGCAGGCTGA TCTGCTGAAA TGCTCTTTCC CTCCTCGAAT GGGTGAAGCC
ACAGAGGCGG TCGGTTACAT GACAATGAAA GGCAATGACG TTTTTAAAGT TGCCGTGACT
CAACTGTCAC AGGTTGTCAC AGATACATTA CGAATCAATC AGATCGATAA ATCTGAAATT
GACTGGTTAG TTCCGCATCA AGCCAACTTC CGAATTATTA AGGCTACGGC TAAGAAGCTC
AACATGAGCT TAGATAAGGT TGTTTTAACC TTAGCTAAGC ACGGTAATAC CTCTGCAGCT
TCGGTACCCA TCGCTTTGGA TGAGGCTGTC AGGGATGGCC GAATTCAGCG TGGCCAGCTG
ATCATGCTCG AGGCTTTCGG TGCCGGGTTT GCGTGGGGAA GTGCACTAAT TCGTTTTTAA
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| Protein sequence | MHTKILGTGS YLPAQVRSNQ DLEQMVETTD QWIVERTGIS ERRIAAADES VSTMGYEAAV
KALEMAGIDA NELDMIVCGT TSASNAFPAA ACEIQAKLGV HTIPAFDIAA ACSGFVYALS
VADQFVKSGA AKKVLVIGAD VLSRLCEPED RSTIILFGDG AGAAVVGASS EPGILSTHIY
ADGRQADLLK CSFPPRMGEA TEAVGYMTMK GNDVFKVAVT QLSQVVTDTL RINQIDKSEI
DWLVPHQANF RIIKATAKKL NMSLDKVVLT LAKHGNTSAA SVPIALDEAV RDGRIQRGQL
IMLEAFGAGF AWGSALIRF
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