| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2622 |
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| Symbol | |
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| ID | 5613646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3174446 |
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| End bp | 3175702 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640933541 |
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| Product | 3-oxoacyl-(acyl-carrier-protein) synthase II |
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| Protein accession | YP_001474357 |
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| Protein GI | 157375757 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000449492 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000043665 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTATATAG GTGAAAGTGT GTCTAAACGT CGTGTAGTCG TAACAGGACT CGGTCTGGTC
ACTCCTGTAG GGAATACTGT TGATTCTTCC TGGAAAGCCC TTGTTTCAGG TAAAAGTGGT
ATTGCGCCGA TAACTAAATT TGATGCCAGC GAGTTTTCGA CTCGTTTCAG CGGCTCGGTC
AAAGATTTTG ATGTCGAGCA ATATATGTCT AAAAAAGACG CTCGCAAGAT GGATCTGTTT
ATCCAATATG GTATGGCCGC CGGTATTCAG GCTGTAACCG ACTCTGGTCT CGATATGGAT
AAGCTCGATC CTGCCCGTGT GGGTACGGCT GTCGGCGCCG GAATGGGCGG TATGCCACTG
ATTGAAAAAG GTCATGCTGC GTTGATGAAA GGCGGGCCTC GTAAGATCTC ACCTTTTTTC
GTGCCAAGTA CCATTATCAA TATGATCTCG GGTCATCTTT CGATTAAATA TGGCATGACA
GGGCCTAACT TTGCCGTGAC TACAGCCTGT ACTACCGGTG TGCATAACAT AGGTTTTGCC
GCACGGACTA TCGCTTATGG CGACGCCGAT GTGATGGTTG CCGGTGGTGC TGAAGATGTG
ACTTGTCCTT TAGCCGTTGG TGGTTTCGGT TCGGCTAAGG CATTATCGAC CCGCAACGAT
GATCCGCAAG CGGCGAGTCG CCCTTGGGAC AGAGACCGTG ATGGCTTCGT TATTGGTGAC
GGCGCTGGTG TCATGGTTAT GGAAGAGTAT GAGCATGCTA AGGCACGCGG AGCGACCATT
TATGGTGAGC TCGTTGGTTT TGGTATGAGT GGTGATGCAT TCCACATGAC ATCGCCTCCA
GCCGATGGTG CGGGCGCTGC AGCGGCGATG GTCAATGCCA TTAATGATGC AAAACTTGCA
AACGAAAGTA TTGGTTATAT TAACGCTCAT GGTACATCGA CCCCTGCGGG TGATAAAGCC
GAAGCGGCGG CGGTTAAATC AGTATTTGGC GATCATGCTT ATAATCTACT CGTTAGCTCG
ACTAAATCTA TGACGGGGCA TCTGTTGGGT GCTGCTGGCT CTGTAGAAGC GATTATTACC
TTGCTTGCAC TTAAAGATCA GGTTATTCCT CCAACATTGA ATTTGGATAA CCCGGATGAA
GGTTGTGATT TAGATTTCGT GCCTCACACC GCAAGGGATC ACAAGTTTGA TTACGGCCTT
TGTAATTCAT TTGGCTTTGG TGGCACAAAC GGCTCTCTGT TGTTTAAGAA AGTATAA
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| Protein sequence | MYIGESVSKR RVVVTGLGLV TPVGNTVDSS WKALVSGKSG IAPITKFDAS EFSTRFSGSV
KDFDVEQYMS KKDARKMDLF IQYGMAAGIQ AVTDSGLDMD KLDPARVGTA VGAGMGGMPL
IEKGHAALMK GGPRKISPFF VPSTIINMIS GHLSIKYGMT GPNFAVTTAC TTGVHNIGFA
ARTIAYGDAD VMVAGGAEDV TCPLAVGGFG SAKALSTRND DPQAASRPWD RDRDGFVIGD
GAGVMVMEEY EHAKARGATI YGELVGFGMS GDAFHMTSPP ADGAGAAAAM VNAINDAKLA
NESIGYINAH GTSTPAGDKA EAAAVKSVFG DHAYNLLVSS TKSMTGHLLG AAGSVEAIIT
LLALKDQVIP PTLNLDNPDE GCDLDFVPHT ARDHKFDYGL CNSFGFGGTN GSLLFKKV
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