Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2598 |
Symbol | pheS |
ID | 5613452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 3148871 |
End bp | 3149854 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640933517 |
Product | phenylalanyl-tRNA synthetase subunit alpha |
Protein accession | YP_001474333 |
Protein GI | 157375733 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0016] Phenylalanyl-tRNA synthetase alpha subunit |
TIGRFAM ID | [TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00149835 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCACAGT TAACAGAGAT CGTAGAACAG GCCTTAGCTG CCATTGAAGG GACCGAAGAT TTAAAAGCCC TTGATGAGCT TCGTGTCGAT TACCTTGGAA AGAAAGGTAA AATTACCGAC ATGATGAAGA TGATGGGGAA GCTAAGTCCG GCCGAAAAAC CGGCATTTGG CCAAGCTGTT AATCAGGCGA AACAAGCAGT ACAAAAGCAG CTGTCTGAGC GAATAGACAA TCTGAAGGCA AAAGAGCTTG AAGCACAACT TGTAGCAGAA AGCATCGATG TCTCACTACC GGGTCGTCGT ATCGACAACG GTGGTCTGCA TCCTGTGACT CGCACTATCG AAAGAATAGA AACTTTCTTT GGTGAGCTTG GCTTTAGTGT CAAGGAAGGT CCGGAAATCG AAGATGACTT CCACAATTTC GATGCCTTGA ATATTTCTGA GCACCATCCA GCTCGTGCCG ACCATGATAC GTTCTACTTT AATCCAAAGG TAATGTTGCG TACTCAAACT TCCGGTGTAC AGATCCGTAC CATGGAAAAT GAGAAGCCAC CTCTGCGTAT TATCTCTCCA GGTCGCGTAT ACCGTAACGA TTACGATCAG ACTCACACGC CTATGTTCCA TCAGGTTGAG GGTTTGTTGG TTGCTGAGAA CGTCAACTTT GCCGAGCTTA AAGGCATACT GCACGACTTC TTACGTAACT TCTTTGAGGA AGACTTAGAA GTCCGTTTCC GTCCTTCATA CTTCCCCTTT ACAGAGCCTT CGGCTGAAGT TGATGTTATG GGTAAAAACG GTAAATGGCT TGAAGTGCTT GGCTGCGGCA TGGTGCATCC AAATGTACTG CGTAGTGTTG GCATCGATCC TGAGAAATAC TCTGGTTTTG CTTTTGGTAT GGGTGTTGAG CGTCTGTCGA TGTTGCGTTA CGGCGTTAAC GATCTACGTT CTTTCTTTGA AAATGACCTA CGTTTCCTCA AGCAATTTAA ATAA
|
Protein sequence | MSQLTEIVEQ ALAAIEGTED LKALDELRVD YLGKKGKITD MMKMMGKLSP AEKPAFGQAV NQAKQAVQKQ LSERIDNLKA KELEAQLVAE SIDVSLPGRR IDNGGLHPVT RTIERIETFF GELGFSVKEG PEIEDDFHNF DALNISEHHP ARADHDTFYF NPKVMLRTQT SGVQIRTMEN EKPPLRIISP GRVYRNDYDQ THTPMFHQVE GLLVAENVNF AELKGILHDF LRNFFEEDLE VRFRPSYFPF TEPSAEVDVM GKNGKWLEVL GCGMVHPNVL RSVGIDPEKY SGFAFGMGVE RLSMLRYGVN DLRSFFENDL RFLKQFK
|
| |