Gene Ssed_2574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2574 
Symbol 
ID5610196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3124800 
End bp3125216 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content46% 
IMG OID640933493 
Producthypothetical protein 
Protein accessionYP_001474309 
Protein GI157375709 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCTATC TGTTTGCAGC GGAAGCTATG CTCTTTACTC ATGTTCTTTT TGTTGGATTC 
GTTATATTCG GTCTGTTTCT GATCTTAGCC GGTAAGCTAT TTTCGTGGTC TTGGGTTCGA
AATCCATGGT TTCGTTTGGC CCACATCACT GGTCTTGCGG TTGTCGTGCT CCAGTCATGG
TTTGGCGTAA TTTGCCCGCT CACAAGTTGG GAAATGGCGC TCCGTTCTAA GGCTGGCGAT
GCTGTGTATG CGGGTTCATT TGTATCTCAT TGGCTAACAG AAGTTTTATA TTATCAGGCT
CCTGAGTGGG TGTTTATAGT TTGCTACACC ACATTTGGAT TGCTTGTTTT GGCTTGTTGG
TTTTGGGTGC GTCCGCGTTC GTTTACTACG CGCGGAAATC ATATACCACC TAACTAG
 
Protein sequence
MFYLFAAEAM LFTHVLFVGF VIFGLFLILA GKLFSWSWVR NPWFRLAHIT GLAVVVLQSW 
FGVICPLTSW EMALRSKAGD AVYAGSFVSH WLTEVLYYQA PEWVFIVCYT TFGLLVLACW
FWVRPRSFTT RGNHIPPN