| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2544 |
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| Symbol | |
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| ID | 5609851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3089601 |
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| End bp | 3090668 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640933463 |
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| Product | imidazole glycerol-phosphate dehydratase/histidinol phosphatase |
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| Protein accession | YP_001474279 |
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| Protein GI | 157375679 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0131] Imidazoleglycerol-phosphate dehydratase
[COG0241] Histidinol phosphatase and related phosphatases |
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| TIGRFAM ID | [TIGR01261] histidinol-phosphatase
[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGA AAATATTATT TATCGACCGT GATGGCACCA TCATCGAAGA GCCTGTCACC
GACAAGCAGG TGGATAGCCT GGCTAAGCTG GTTTTCGAAC CCACTGTGAT CCCCGCACTG
CTGAAATTGC AAAATGCCGG TTATCGCCTG GTCATGGTGA GTAACCAAGA TGGTTTAGGC
ACGCCCTCTT TTCCTAAGGA TGACTTCGAT GCCCCTCAGG ATATGATGAT GCAGATCCTA
AGCAGCCAGG GCATTATCTT CGATGAAGTG CTTATCTGTC CTCACTTTAA CGATGAAAAC
TGCAGTTGTC GCAAACCAAA ACTCGGGCTG GTCAAAGATT ACCTGACCCA GGGCAAGGTA
GACTTCACTC AATCGGCCGT GATTGGCGAT CGCGAAACGG ACATGGGACT CGCCGATGCC
ATGGGCATTC AGGGACTCCA ATACGACCCT GAGACCCTCA ACTGGAATGC CGTTACCGAT
ATTCTATTGA ACCGCAACCG CAGCGCTACT GTGGTAAGAA CCACCAAAGA GACCGACATT
CGAGTCACTA TCGATCTCGA CTCACAAGAG AAAGGCAAGA TAGTCACCGG CATCGGCTTC
TTCGACCACA TGCTGGATCA AATCTCGACT CACGGTAACT TCAAGATGGA CGTTAAGGTC
GACGGCGATC TCGAGATCGA CGATCATCAC AGCGTCGAAG ATACGGCGCT GGCAATTGGC
GAAGCAATCA GAGAAGCCCT TGGTGATAAA CGCGGTATCG CACGCTTTGG TTTCAGCATT
CCCATGGATG AAGCGAGCGC CGAGTGTCTG CTCGACCTGT CGGGTCGCCC CTTCATCAAG
TTTGATGGCG AATTTGAACG CGAACTGGTA GGTGAGATGG CCACCGAGAT GGTGCCGCAC
TTCTTCCGCT CCTTCGCCGA CGGCCTACGC TGCACCTTGC ACCTCAAAAC CTTGGGCGAT
AACGATCACC ACAAGGTTGA AAGCCTCTAT AAAGTCTTAG GCCGCACCCT GCGTCAGGCT
GTTAAGGTTG AGGGTGACCT GCTCCCCTCG AGTAAAGGTG TCTTATGA
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| Protein sequence | MKQKILFIDR DGTIIEEPVT DKQVDSLAKL VFEPTVIPAL LKLQNAGYRL VMVSNQDGLG
TPSFPKDDFD APQDMMMQIL SSQGIIFDEV LICPHFNDEN CSCRKPKLGL VKDYLTQGKV
DFTQSAVIGD RETDMGLADA MGIQGLQYDP ETLNWNAVTD ILLNRNRSAT VVRTTKETDI
RVTIDLDSQE KGKIVTGIGF FDHMLDQIST HGNFKMDVKV DGDLEIDDHH SVEDTALAIG
EAIREALGDK RGIARFGFSI PMDEASAECL LDLSGRPFIK FDGEFERELV GEMATEMVPH
FFRSFADGLR CTLHLKTLGD NDHHKVESLY KVLGRTLRQA VKVEGDLLPS SKGVL
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