| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2528 |
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| Symbol | |
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| ID | 5609857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3071838 |
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| End bp | 3072557 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640933447 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474263 |
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| Protein GI | 157375663 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.721153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGATA AACAGAAAAA CATTGAAGAA TTGACCGTGT TAGCGTTAGA CACCTGCACC
GAATCATGCT CTGCAGCCTT GATTTCAGGT GGTAAGATCT ATTCTGAGCA GGTCGACGCG
CCTCGTGAAC ATAGCCAGAG AATTTTACCT ATGGTCGATT CGGTGCTATC TCAGGCGAAT
ATTCAACTTC AAAATGTTGA TGTAATCGCA TATGGGCGTG GCCCGGGAAG TTTTACCGGT
ATCAGAATTT GTACCAGCAT GACTCAAGGC CTGGCTTTAG GCCAAGATCT TCCGGTTATC
GGGATCTCCT CATTGCAAAC GATGGCTCAG GCTGTGTTTG ATGACCAGGG CGGAGAACAG
TTTATCGCTG CCATCGATGC CAGAATGGGT GAAGTGTACT GGGGACAGTT TACAGTCAAG
GATGGTTTGG TTGCGCTCAT CGATGCCGAG CTGGTCTGTT CACCCGATGA TGTGCCACTG
ACCTTGGATG TCAGTCAGCC TATTGTGGTT TGTGGTACCG GCTTTGATAC TTATCCTAAT
CTATTGAACC TGTCAGAGAA TATTTCACTG GCTGAAAATG TTAAGTTTCC CGATGCCAAA
GCGATGTTGG CACTGGCCCA AGCCGGTTTT GAACTTGGGT TAAGTACAGC CGTTGACGAC
TTGGCTCCCG TGTATGTACG CGATACTGTC ACCTGGAAGA AGCTACCCGG GCGAGAGTGA
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| Protein sequence | MTDKQKNIEE LTVLALDTCT ESCSAALISG GKIYSEQVDA PREHSQRILP MVDSVLSQAN
IQLQNVDVIA YGRGPGSFTG IRICTSMTQG LALGQDLPVI GISSLQTMAQ AVFDDQGGEQ
FIAAIDARMG EVYWGQFTVK DGLVALIDAE LVCSPDDVPL TLDVSQPIVV CGTGFDTYPN
LLNLSENISL AENVKFPDAK AMLALAQAGF ELGLSTAVDD LAPVYVRDTV TWKKLPGRE
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