Gene Ssed_2514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2514 
Symbol 
ID5610059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3059921 
End bp3060454 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content49% 
IMG OID640933433 
Productdisulfide bond formation protein B 
Protein accessionYP_001474249 
Protein GI157375649 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1495] Disulfide bond formation protein DsbB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000563351 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.732861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATGG AGATCAACCT CTTGAACCCT GTGACACGAT TCGCTCAATC TCGCCTGGCC 
TGGCTAATTC TTGCAGGTAC AGCCCTAGGG CTGGAGCTTT GTGCCCTTTT CTTTCAACAT
GTAATGAAAC TCGATCCCTG TGTCATGTGC ATCTACCAAA GATTGGCCAT TTTTGGCATA
TTGGGCGCAG CACTTATTGG CTTAGTCGGT TATAAGAATC GTTTTTTGCG CTTTATCGCC
GTACTGGGCT GGGGAATTAG TGCCGCATGG GGCTTGAAAC TGGCGTTAGA GTTAGTGGAT
ATGCAGACGA ACCCTTCTCC GTTCTCTACC TGCTCTTTCC TGCCGGAATT CCCGAGTTGG
ATGCCGCTAC ATGAATGGTT ACCTTCGGTA TTTATGCCAT CGGGCATGTG CAGCGATATC
CCATGGCAGA TGATGGGAGT GACGATGGGA CAATGGATGA TTGTCGCATT TTCAACTTAT
CTGTTGGCGC TGGCTATCTT TATGATCCCC GCACTCAGTA AAACCGGGAA GTAA
 
Protein sequence
MIMEINLLNP VTRFAQSRLA WLILAGTALG LELCALFFQH VMKLDPCVMC IYQRLAIFGI 
LGAALIGLVG YKNRFLRFIA VLGWGISAAW GLKLALELVD MQTNPSPFST CSFLPEFPSW
MPLHEWLPSV FMPSGMCSDI PWQMMGVTMG QWMIVAFSTY LLALAIFMIP ALSKTGK