Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2514 |
Symbol | |
ID | 5610059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 3059921 |
End bp | 3060454 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640933433 |
Product | disulfide bond formation protein B |
Protein accession | YP_001474249 |
Protein GI | 157375649 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1495] Disulfide bond formation protein DsbB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000563351 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.732861 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTATGG AGATCAACCT CTTGAACCCT GTGACACGAT TCGCTCAATC TCGCCTGGCC TGGCTAATTC TTGCAGGTAC AGCCCTAGGG CTGGAGCTTT GTGCCCTTTT CTTTCAACAT GTAATGAAAC TCGATCCCTG TGTCATGTGC ATCTACCAAA GATTGGCCAT TTTTGGCATA TTGGGCGCAG CACTTATTGG CTTAGTCGGT TATAAGAATC GTTTTTTGCG CTTTATCGCC GTACTGGGCT GGGGAATTAG TGCCGCATGG GGCTTGAAAC TGGCGTTAGA GTTAGTGGAT ATGCAGACGA ACCCTTCTCC GTTCTCTACC TGCTCTTTCC TGCCGGAATT CCCGAGTTGG ATGCCGCTAC ATGAATGGTT ACCTTCGGTA TTTATGCCAT CGGGCATGTG CAGCGATATC CCATGGCAGA TGATGGGAGT GACGATGGGA CAATGGATGA TTGTCGCATT TTCAACTTAT CTGTTGGCGC TGGCTATCTT TATGATCCCC GCACTCAGTA AAACCGGGAA GTAA
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Protein sequence | MIMEINLLNP VTRFAQSRLA WLILAGTALG LELCALFFQH VMKLDPCVMC IYQRLAIFGI LGAALIGLVG YKNRFLRFIA VLGWGISAAW GLKLALELVD MQTNPSPFST CSFLPEFPSW MPLHEWLPSV FMPSGMCSDI PWQMMGVTMG QWMIVAFSTY LLALAIFMIP ALSKTGK
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