| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2512 |
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| Symbol | |
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| ID | 5610057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3057176 |
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| End bp | 3057925 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640933431 |
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| Product | fatty acid metabolism regulator |
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| Protein accession | YP_001474247 |
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| Protein GI | 157375647 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02812] fatty acid metabolism transcriptional regulator FadR |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000912913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.579868 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAATTG TCCAAAAAGC TCCTGTCGTG GCAAAAAACA GAGATATTAT TGAAGCCAAA
GGACCTGCGA GCTTTGCTGA GAAGTATATT GTCCGATCTA TCTGGGAGGA GAAATTCCCG
CCAGGTTCTA TTTTACCAGC AGAGCGTGAA TTATCTGAAC TTATCGGAGT CACGCGCACA
ACGCTTAGGG AAGTCCTGCA ACGTTTAGCC AGAGATGGTT GGCTGACGAT TCAACATGGT
AAACCGACCC GTGTTAACGA TATCTGGGAA ACCTCTGGTC TCAATGTATT AGAAACCATC
GCCGATTTGA ACCCTGCAGG CGAGCCCGTA TTGTTAGAGC AGTTACTTTC TGCAAGAACG
AATATCAGTG CTATCTATTT TAAAGGTGCG GTTCGCCATA ACCCGGAAAA AGTGATCGAA
GTATTAGCAG GCATATCTTC TTTAAACGAT GATCCTAAGG CTTATGTAGA ATTTGATTAT
CAGTTGCACC ATGCCATGGC TTATAACTGT GGCAATCCTC TTTATGTTCT GATCCTAAAC
GGCTTTAAAG GCCTATACAG TCGTGTCGGA GAGGATTATT TTGCGATAGA TAAGGCCCGT
GAGATCGCGC TGGACTTCTA TGAGGCGCTA CTTCAACTTG CTCATGAGAA AAATCACAAT
GCGATCCCTG GCTTAATGCG CAGTTATGGT ATCAATAGTG GTAAAGTTTG GCAGAAATAC
AGAAACAGTC TGCTGGAAAC TGCTGAATAA
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| Protein sequence | MTIVQKAPVV AKNRDIIEAK GPASFAEKYI VRSIWEEKFP PGSILPAERE LSELIGVTRT
TLREVLQRLA RDGWLTIQHG KPTRVNDIWE TSGLNVLETI ADLNPAGEPV LLEQLLSART
NISAIYFKGA VRHNPEKVIE VLAGISSLND DPKAYVEFDY QLHHAMAYNC GNPLYVLILN
GFKGLYSRVG EDYFAIDKAR EIALDFYEAL LQLAHEKNHN AIPGLMRSYG INSGKVWQKY
RNSLLETAE
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