| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2487 |
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| Symbol | |
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| ID | 5610030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3024982 |
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| End bp | 3025608 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640933408 |
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| Product | paraquat-inducible protein A |
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| Protein accession | YP_001474224 |
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| Protein GI | 157375624 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00109447 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.337329 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACAAG AATGTGCTGA CAATAGTGTG GTGTTATGCC GCTCTTGTGA CTTAGTTATC
AGAAAACGTG CGCTACCTTC AGGCGTCCGT GCATTATGTC CTCGCTGTCA TACAACTCTA
TACGACACGC CATACTGTTC AATCAACGGT ATGTTAGCCT TGTGTTTAAC AGCTTTACTT
TTTTTGCTTC CGGCCAATGT ACTGCCAGTG CTTGAGCTGC ACTTTTTAGG CAGTGTCAGA
ACCACGACGA TTATCGAAGG CGCTATGGCG GTATCGAATC AAGGCTATTG GATTGTAGGT
ATCGCCGTTT TAGTTTCAGC AGTCATCGCT CCTGCACTAC TCATTTGGTC TGTATTCTGT
CAAATTTTAA TAATCAAATA TCGTCTAAAC TCCCCCTTTT TTCGTGCGGT ACTGAAACGT
CTACTCAGTT ATCAGGGCTT GTTGGCGCAA TTGAGCATGC TAGAAATTTA TATGATCAGT
ATTCTCGTCT CTGTATTTCA ACTCTCAGAT TTTGCAGATA TTTTCTTAGG GATGGGTACT
TTTTGCTTCG GAATGTTATT TTTGGTCACC CTGTTTCTTC AACGTGAGTA CAATCTGGAA
CATATGTGGA GTGTTTTAGA TGAGTGA
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| Protein sequence | MEQECADNSV VLCRSCDLVI RKRALPSGVR ALCPRCHTTL YDTPYCSING MLALCLTALL
FLLPANVLPV LELHFLGSVR TTTIIEGAMA VSNQGYWIVG IAVLVSAVIA PALLIWSVFC
QILIIKYRLN SPFFRAVLKR LLSYQGLLAQ LSMLEIYMIS ILVSVFQLSD FADIFLGMGT
FCFGMLFLVT LFLQREYNLE HMWSVLDE
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