| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2436 |
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| Symbol | |
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| ID | 5609659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2958516 |
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| End bp | 2958746 |
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| Gene Length | 231 bp |
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| Protein Length | 76 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640933347 |
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| Product | SirA family protein |
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| Protein accession | YP_001474173 |
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| Protein GI | 157375573 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0425] Predicted redox protein, regulator of disulfide bond formation |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00512226 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAATATTA TGGTTTCTAT CGATTTAACG GCAATACGTT GTCCATTAGC TTTAGTGAAA
GTAAAACTCG CATTAAAACA ACTTGAAGAT GGAGAGGTAC TTTGTGTCTC TTTATCTGAC
ATTGGCTCTA GGCAGGATGT TCCCCGTTTT TTAAAAAAAG TCGGATATCG CTATTCTGAG
GTATGTAATG ATGAGAATAT GCTGACAATA AAAATATCTA ATCTTCGTTA G
|
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| Protein sequence | MNIMVSIDLT AIRCPLALVK VKLALKQLED GEVLCVSLSD IGSRQDVPRF LKKVGYRYSE
VCNDENMLTI KISNLR
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