Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2421 |
Symbol | |
ID | 5609832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 2942233 |
End bp | 2942847 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640933332 |
Product | carbonate dehydratase |
Protein accession | YP_001474158 |
Protein GI | 157375558 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0288] Carbonic anhydrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.658807 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000000897123 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAAATAC TAACTCCCCT TTTTGAGAAT AATCGCCGCT GGGCTGAACG TATCGTTAAA GAGACACCTG ATTTTTTTGA ACAGCTCGCG ACTCAACAAA ACCCTGAATA TCTCTGGATC GGTTGCTCAG ACAGCCGCGT TCCTTCCAAC CAGATCATCG ACTTAATGCC CGGTGAAGTG TTTGTTCATC GAAATATTGC CAACATGGTG ATCCACACAG ATTTAAACTG CTTATCGGTA CTGCAATATG CCGTAGAAGT CCTCAAAGTT AAACATATCA TGGTGGTTGG ACACTATGGC TGTGGTGGAG TTAAGGCTTC TATGGGGAAC GAACGACTCG GGCTTATCGA CAACTGGCTC GGCCATATCA GAGATATTCA CCGCCTTCAC AGTAATGAGC TGGATAAGCT TGAGGGTGAA GAGAAGTTTG ATCGTCTCTG CGAGCTAAAC GTCATCGAAC AGGTCGGCAA TGTCTGTAGC ACCAATATAG TACAAGATGC CTGGGCCAGA GGGGAGAATG TATCCGTTCA TGGCTGGATC TATAGTATCG AGAACGGACT ACTCTCAGAT CTAGATGTGA CTGTCGATAA CGAAAAATTT AAACCCCAAG TTTAG
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Protein sequence | MKILTPLFEN NRRWAERIVK ETPDFFEQLA TQQNPEYLWI GCSDSRVPSN QIIDLMPGEV FVHRNIANMV IHTDLNCLSV LQYAVEVLKV KHIMVVGHYG CGGVKASMGN ERLGLIDNWL GHIRDIHRLH SNELDKLEGE EKFDRLCELN VIEQVGNVCS TNIVQDAWAR GENVSVHGWI YSIENGLLSD LDVTVDNEKF KPQV
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