| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2416 |
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| Symbol | |
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| ID | 5609731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2938108 |
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| End bp | 2938617 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640933327 |
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| Product | PTS system glucose-specific transporter subunit |
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| Protein accession | YP_001474153 |
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| Protein GI | 157375553 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2190] Phosphotransferase system IIA components |
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| TIGRFAM ID | [TIGR00830] PTS system, glucose subfamily, IIA component |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.30633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000935977 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGGATTTT TAAGCCGTAT CAGACGTTTA ATGTCGGGGC AAACCAACCT GGTTGGCGGA
ATTGATGTTT TTGCTCCCGT TTCAGGCGAC ATTGTCGCCA TTGAGAAGGT TCCCGACGTC
GTCTTTGCCG AAAAAATTGT CGGTGATGGC CTGGCCATTC AACCAAAAGG TCACTTGATT
GTCGCTCCCA TCGACGGAAC TATCGGGAAA ATATTCGAAA CAAATCATGC GTTCAGCATC
GAATCACCTC AAGGGCTGGA ACTCTTTGTC CATTTCGGTG TAGGCACAGT AGAGCTGCGT
GGTAATGGAT TTAAACGTCT CGCCGAAGAG GGACAAGTTG TTAAGGTGGG TGAGCCTATT
CTTGAATTCG ATCTGGGATA CCTTAAAGAG CAAGTAGAGA GTCTGCTCAC CCCTGTGGTA
CTGGCTAATA TGGAAGATGT CCGCTCATTG GATAAACGTC ATGGTTCCAT AGAAGCAGGT
AAAGACGTTA TTTTCTCGGT AGAGCTCTGA
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| Protein sequence | MGFLSRIRRL MSGQTNLVGG IDVFAPVSGD IVAIEKVPDV VFAEKIVGDG LAIQPKGHLI
VAPIDGTIGK IFETNHAFSI ESPQGLELFV HFGVGTVELR GNGFKRLAEE GQVVKVGEPI
LEFDLGYLKE QVESLLTPVV LANMEDVRSL DKRHGSIEAG KDVIFSVEL
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