| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2409 |
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| Symbol | |
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| ID | 5613468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2929405 |
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| End bp | 2931495 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640933320 |
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| Product | elongation factor G |
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| Protein accession | YP_001474146 |
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| Protein GI | 157375546 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0480] Translation elongation factors (GTPases) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000720128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000820155 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGATT TAGCAAAGTA CAGAAACATT GGTATCTTCG CTCACGTTGA TGCGGGTAAG
ACCACCACAA CAGAGCGTAT CCTTAAGCTT ACCGGTAAGA TCCATAAGAT CGGTGAAGTT
CATGATGGTG AATCTACAAC TGACTTCATG GAACAGGAAG CTGAGCGTGG TATTACCATT
CAGTCTGCTG CTGTAAGTTG TTTTTGGAAC GATCACCGTT TTAACGTTAT TGACACCCCT
GGCCACGTTG ACTTCACAGT TGAAGTTTAC CGTTCTCTTA AAGTCCTTGA TGGTGGTGTT
GGTGTATTCT GTGGTTCAGG CGGTGTTGAG CCTCAGTCAG AGACTAACTG GCGTTATGCG
AACGAATCAG AAGTTGCACG TATTATCTTC GTAAACAAGT TAGACCGTAT GGGTGCTGAC
TTCTTACGTG TAGTTAAGCA AACACAAGAT GTACTAGCGG CTAACCCACT AGTTATGGTT
CTTCCTATCG GTATCGAAGA TGAGTTCAGT GGTGTTGTTG ACCTGCTAAC TCGTAAAGCT
TGGATATGGG ACGAAACAGG TGAAGCTGAG AACTACAAGA TTGAAGATGT TCCAGCTGAC
ATGGTTGAGC TTGTAGAAGA GTACCGTGAG ATGCTAATCG AAACTGCTGT TGAGCAGGAC
GATGATCTGA TGGAATCTTA CATGGAAGGT GAAGAGCCAT CTATGGAAGA CATTAAGCGT
TGTATCCGTA AGGGTACTCG TACAATGGAC TTCTTCCCAA CATACTGTGG TTCTGCTTTC
AAGAACAAAG GTATGCAGCT TCTTCTTGAT GCTGTTGTTG ACTACCTTCC AAACCCAGTT
GAAGTTGATC CACAGCCTCT TACTGATGAA GAAGGTAACG AGACTGGCGA GCATGCAATC
GTTGCTATTG ATGAGCCATT TAAAGCACTA GCATTCAAAA TCATGGATGA CCGTTTCGGT
GCCCTAACCT TCGTACGTAT CTACTCAGGT AAGATCAACA AAGGTGACAC CATCCTTAAC
TCGTTTACAG GTAAGACTGA ACGTGTTGGA CGTATGGTTG AGATGCAAGC TGATGAGCGT
AACGAACTTG ATTACGCACA AGCGGGTGAC ATCATCGCTA TCGTTGGTAT GAAGAATGTT
CAAACGGGTC ACACTCTGTG TGATGTTAAG AACCCTTGTA CTCTTGAAGC TATGGTATTC
CCTGAGCCAG TTATCTCTAT CGCTGTTGCG CCAAAAGATA AAGGCGGATC AGAGAAGATG
GGTATCGCTA TCGGTAAGAT GATTGCAGAA GACCCATCAT TCCGCGTAGA GACTGACGAA
GATTCAGGTG AAACTATTCT TAAAGGTATG GGTGAGCTTC ACCTAGACAT TAAGGTAGAT
ATCCTTAAGC GTACTTACGG CGTTGACCTA ATTGTAGGTG AGCCTCAAGT TGCTTACCGT
GAAACTATCA CTAAGGTTAC TGAAGATAGC TACACGCATA AGAAACAGTC TGGTGGTTCT
GGTCAGTTCG GTAAGATCGA CTACGTTATC CGTCCAGGTG AGCAAAACAC TGGTTTCACT
TTCAGCTCTA AAGTTGTTGG TGGTAACGTT CCTAAGGAAT TCTGGCCAGC AGTTGAGAAA
GGCTTCGCTA GCATGATGAA TACCGGTACT GTTGCTGGTT TCCCTGTGTT AGACGTTGAA
CTAGAGCTTG TTGATGGTGC ATTCCACGCA GTGGATTCAT CTGCAATCGC TTTCGAAATC
GCTGCTAAAG GCGCTTTCCG TCAGTCAATG CCTAAAGCCG GTGCACAACT TCTTGAGCCT
ATCATGAACG TTGACGTATT CAGCCCAGAT GATAACGTTG GTGACGTAAT TGGTGACCTT
AACCGTCGTC GCGGTATGAT CAAAGATCAA AACGCTGGCG TTACAGGTGT TCGTATTAAA
GCTGACGTAC CGTTATCAGA AATGTTCGGT TACATCGGTT CACTACGTAC TATGACATCT
GGTCGTGGCC AATTCTCTAT GGAATTCGCT CACTACTCAC CATGTCCAAA CAGTGTTTCT
GAGAAAGTTA TCGCTGACGT TAAAGCACGT GAAGCTGCAG CTAAGAAGTA A
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| Protein sequence | MTDLAKYRNI GIFAHVDAGK TTTTERILKL TGKIHKIGEV HDGESTTDFM EQEAERGITI
QSAAVSCFWN DHRFNVIDTP GHVDFTVEVY RSLKVLDGGV GVFCGSGGVE PQSETNWRYA
NESEVARIIF VNKLDRMGAD FLRVVKQTQD VLAANPLVMV LPIGIEDEFS GVVDLLTRKA
WIWDETGEAE NYKIEDVPAD MVELVEEYRE MLIETAVEQD DDLMESYMEG EEPSMEDIKR
CIRKGTRTMD FFPTYCGSAF KNKGMQLLLD AVVDYLPNPV EVDPQPLTDE EGNETGEHAI
VAIDEPFKAL AFKIMDDRFG ALTFVRIYSG KINKGDTILN SFTGKTERVG RMVEMQADER
NELDYAQAGD IIAIVGMKNV QTGHTLCDVK NPCTLEAMVF PEPVISIAVA PKDKGGSEKM
GIAIGKMIAE DPSFRVETDE DSGETILKGM GELHLDIKVD ILKRTYGVDL IVGEPQVAYR
ETITKVTEDS YTHKKQSGGS GQFGKIDYVI RPGEQNTGFT FSSKVVGGNV PKEFWPAVEK
GFASMMNTGT VAGFPVLDVE LELVDGAFHA VDSSAIAFEI AAKGAFRQSM PKAGAQLLEP
IMNVDVFSPD DNVGDVIGDL NRRRGMIKDQ NAGVTGVRIK ADVPLSEMFG YIGSLRTMTS
GRGQFSMEFA HYSPCPNSVS EKVIADVKAR EAAAKK
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