| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2360 |
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| Symbol | |
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| ID | 5612971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2873696 |
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| End bp | 2874265 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640933271 |
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| Product | NUDIX hydrolase |
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| Protein accession | YP_001474097 |
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| Protein GI | 157375497 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000190371 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00362317 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAACTTAA TAGAGTTGAG GATAAGGTAT AACCTTCAAC CTCTTACCGC TCTCAAGAGT
CCCCTCATCT CCAGTAAACT ACAGCCTGCA GCCGTGCTTA TCGCTTTCAC TCAGGTCAAG
AATGAAACTC ACCTCATTCT GACTCAAAGA CCCAGCCATC TCAGGCATCA CCCTGGCCAA
ATCAGTTTTC CCGGCGGTAA AGTAGAAAAT AGTGATAGCA GCCACATTGC CACAGCCTTA
AGAGAAGCCG AGGAGGAGAT TGCACTGCCG ATATCAAATG TAGAAGTACT GGGACAATAT
CCTAAATATA AGACGTTTAC AGGCTTTGAG ATCACACCTG TCTTTGGCAT CGTAAAAAAT
GATTTTGACC CCATACTCGA CCCGGATGAA GTTGCTGATT ACTTTACGAT TCCTTTGAAA
TTTCTATTAA ACACAGCCAA CAGGCAAGAA TACCTCTACC GCCGTCACGG CATCGAATAC
CCGGTTTACT TTATCCCCTA TAAGCAGCAT GTTATCTGGG GCGCAACGGC GGCAATTATC
GAGCACTTAT GTAAGCAGCT GAGTCAATAA
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| Protein sequence | MNLIELRIRY NLQPLTALKS PLISSKLQPA AVLIAFTQVK NETHLILTQR PSHLRHHPGQ
ISFPGGKVEN SDSSHIATAL REAEEEIALP ISNVEVLGQY PKYKTFTGFE ITPVFGIVKN
DFDPILDPDE VADYFTIPLK FLLNTANRQE YLYRRHGIEY PVYFIPYKQH VIWGATAAII
EHLCKQLSQ
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