| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2348 |
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| Symbol | |
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| ID | 5611327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2855422 |
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| End bp | 2856054 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640933259 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474085 |
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| Protein GI | 157375485 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2095] Multiple antibiotic transporter |
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| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0647314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000838099 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGATTTAA CACTTTATGT TAAATTTTTT CTTGGATTAG TGGCGATCAT TAATCCCGTT
GGCTTGTTAC CGGTTTTTGT CAGCTTAACC AGTCATCAGA CTGAAGCTGA ACGTAACCAT
ACCGGTAAGG TAGCTAATTT TGCGGTGGTC GTCATTCTAT TGGTGACGAT TGTAGCGGGA
CAACATATTT TGAATATGTT TAGTATTTCG CTTTCAGCAT TTCGTATAGC GGGTGGTTCG
CTGATAGCCA TTATTGCCAT GTCTATGCTT CAGGGTAAGT TAGGTGAAGT GAAACGCAAT
AAAGAGGAGG ACCGTGAAGC GTCGGGGATG GAATCCGTCG CAGTCGTTCC TTTAGCGCTG
CCGTTAATGG CTGGCCCCGG TGCGATCAGT TCGGTAATCG TGTCGGCCGC AGAGCATGAT
TCTTTCATTA ACCTTATCGG CATGTCTTTG ACAGTCGTCT TGTTTGGAAT AACGAGTTTT
GTACTCTTTA GAATGGCACC TGTGATCTAT AAGGTTTTGG GAAAGACGGG AATTAACGTG
ATCACACGTT TGATGGGACT ATTGATGCTA TCCATCGGAA TCGAAGTGAT TGCCGCAGGT
TTCAAAGGCC TCTTCCCGAG TTTGCTGGGT TAG
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| Protein sequence | MDLTLYVKFF LGLVAIINPV GLLPVFVSLT SHQTEAERNH TGKVANFAVV VILLVTIVAG
QHILNMFSIS LSAFRIAGGS LIAIIAMSML QGKLGEVKRN KEEDREASGM ESVAVVPLAL
PLMAGPGAIS SVIVSAAEHD SFINLIGMSL TVVLFGITSF VLFRMAPVIY KVLGKTGINV
ITRLMGLLML SIGIEVIAAG FKGLFPSLLG
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