| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2334 |
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| Symbol | |
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| ID | 5614133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2833215 |
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| End bp | 2833991 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933245 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_001474071 |
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| Protein GI | 157375471 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000909068 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000846948 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACTTTA TATCTACAGG CCAGGGATCG ACTGTCATAT TGATCCATGG TCTTTTCGGT
AATTCAGATA ATTTGAAAAC ACTGGGAAGA ACCCTGGAAG TAAACCATAG GGTCATACGA
GTCGATGTGC CTAATCATGG ATTGAGTGCA CATTGGGAAT CGATGGACTA CCCCACTCTG
GCTCAAGCCG TCATCGAGTT AATGGATAGA TTATCGATTC CACAGGCGCA TCTGGTCGGG
CATTCTATGG GGGGCAAGAT AGCCATGGCC GCCGCGCTCA ATTATCCGGA GCGAATTCAA
TCTGTGATTG CAGCCGATAT CGCGCCGGTA AGCTACCAAT CCAGGCACGA TGCCGTATTT
GCAGCGCTCG ACTCGATTGA GCTAAGTCTG GTTCAAAATA GAGCCCAGGC TCTGAGCCAA
CTATTAAATG CAGGCATTGA TGAAGGTACG GCCCAATTCC TACTGAAAAA CCTGTCAAGA
AGTGACACCG GCTTTCAATG GAAAATGAAC CTCACAGGGC TAAAGACGTG TTACGCCAAT
CTGATAGGCT GGTATAACGA TGTCGCCGCT CCATTGCAAT ACACTGGTGC CAGTTTGTTT
ATCAGAGGTG GTGAGTCTGA TTATGTTACC TCTGAGCACA GACAAGCTAT TTTAGCCCAG
TTCCCTCATG TAAAAGCAAA AACGATTGAA GGAACAGGTC ATTGGTTACA TGCACAAAAA
CCTAACATTT TTAACCGAAT CGTCGGTGAC TTTATCGAAA AGAATGATAG GAATTAA
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| Protein sequence | MHFISTGQGS TVILIHGLFG NSDNLKTLGR TLEVNHRVIR VDVPNHGLSA HWESMDYPTL
AQAVIELMDR LSIPQAHLVG HSMGGKIAMA AALNYPERIQ SVIAADIAPV SYQSRHDAVF
AALDSIELSL VQNRAQALSQ LLNAGIDEGT AQFLLKNLSR SDTGFQWKMN LTGLKTCYAN
LIGWYNDVAA PLQYTGASLF IRGGESDYVT SEHRQAILAQ FPHVKAKTIE GTGHWLHAQK
PNIFNRIVGD FIEKNDRN
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