| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2327 |
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| Symbol | |
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| ID | 5611256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2824454 |
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| End bp | 2826088 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640933238 |
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| Product | dihydrolipoamide acetyltransferase |
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| Protein accession | YP_001474064 |
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| Protein GI | 157375464 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00355536 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTAAAG AGTTTATTCT ACCCGATATT GGCGAGGGTG TTGTCGAGTG TGAGCTGGTC
GAATGGCTGG TGAGTGAAGG TGATACTGTC AGTGAAGATC AGCCTATTGC TGATGTGATG
ACGGATAAGG CATTAGTCCA GATCCCGGCT CCTCACGCCG GTGTCATCAA AAAACTTCAC
TACGCCAAAG GTGAGATTGC CAAGGTGCAT GCGCCACTTT ATTCTGTTGA TATAAAAGGG
AATAGTTCAC CAGCTATTGA TGCCTCTTCT GTTGTTGATG ACCAGATGGA TGCTGAAGTG
GCGAAAAGTG ATGAAATTAT TTCATCTGAA GCCGTGACGT CTGTTCCGCA AAAGGGCGTT
CAAGTTGAAG AGTTCCTGTT GCCGGATATC GGTGAAGGAA TTGTAGAGTG TGAGTTGGTT
GAGTGGTTGG TGAGCGAAGG TGAGCAAGTC GTCGAAGATC AACCCATAGC CGACGTTATG
ACAGATAAGG CGCTGGTTCA GATCCCCGCG ATAAAGTCGG GGAAAATTGT CAAGCTGCAC
TACCGTAAAG GTCAGCTGGC CAAGGTTCAT GAACCCCTGT TTGCCGTAGA GGTGGAGCTG
GAGTTGCCCG CTGCAGTCCG TGAAGAGAGC GAGAAAATAC ACACCGCAGA ATCCATATCC
GCATCTGGTG ATATCAAAGA GCCGGTCGCT CAGGGTAAGG CATTAGCCAG CCCTGCGGTT
AGACGCTTGG CTCGATCATT GGATATCGAT ATCGCTCAGG TTCCCGGAAC TGGTAAAAAT
GGTCGTGTAT TTAAGGATGA TATCGAACGC TACCATTCGG GCACAAGCGC CCATACCAAT
ACAATGACCG CAAGTCCTGA ACATGATGTC AGCTCAAGCA CGCTATCTGC GCCGGGTATG
AACACCGGCT CAACAGATGG CGGGCAGACT ATCGATAGAG TCGAGCCTAT TCGTGGTGTC
AAAGCTGTGA TGGCTAAGAT GATGACCGAG TCGGTTAGCA CTATCCCTCA CTTTACCTAC
TGTGAAGAGA TCGATCTGAC TGAGCTGGTA ACATTGCGTG AGAGCATGAA GAAAAAGTAC
TCCACCGATG AGCTCAAGCT CACCATGATG CCTTTTTTCA TGAAATCTAT GTCGCTTGCC
CTAAAGCAGT TTCCGGTGAT AAACAGTCGG GTCAATGAAG ATTGCAGCGA GCTTACCTAT
CTTTCCAGTC ATAACATCGG CATGGCAGTC GACTCGAAAG TGGGCTTGTT GGTACCAAAC
GTTAAAGATG TACAGAACAA GTCTATCTTA GAGATAGCCG CAGAGATCAC CAGATTGACG
ACCGCGGCGC GCAGCGGTCG AGTCAGTCCG AACGATCTTA AGTCTGGCAC GGTTTCTATC
TCTAACATCG GTGCCTTAGG TGGAACTGTG GCGACTCCTA TCATCAACAA GCCTGAGGTG
GCGATTGTCG CCTTAGGTAA GTTACAGGTG TTACCGCGCT TTAATGCCGA TGGCGAAGTC
GAAGCAAGGA AGATCATGCA GATCAGCTGG TCCGGTGATC ATCGAGTTAT CGATGGTGGC
ACGATTGCTC GGTTCTGTAA CTTGTGGAAG CAATACCTAG AAGAGCCTCA TGAGATGCTG
CTCGCTATGC AGTAG
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| Protein sequence | MIKEFILPDI GEGVVECELV EWLVSEGDTV SEDQPIADVM TDKALVQIPA PHAGVIKKLH
YAKGEIAKVH APLYSVDIKG NSSPAIDASS VVDDQMDAEV AKSDEIISSE AVTSVPQKGV
QVEEFLLPDI GEGIVECELV EWLVSEGEQV VEDQPIADVM TDKALVQIPA IKSGKIVKLH
YRKGQLAKVH EPLFAVEVEL ELPAAVREES EKIHTAESIS ASGDIKEPVA QGKALASPAV
RRLARSLDID IAQVPGTGKN GRVFKDDIER YHSGTSAHTN TMTASPEHDV SSSTLSAPGM
NTGSTDGGQT IDRVEPIRGV KAVMAKMMTE SVSTIPHFTY CEEIDLTELV TLRESMKKKY
STDELKLTMM PFFMKSMSLA LKQFPVINSR VNEDCSELTY LSSHNIGMAV DSKVGLLVPN
VKDVQNKSIL EIAAEITRLT TAARSGRVSP NDLKSGTVSI SNIGALGGTV ATPIINKPEV
AIVALGKLQV LPRFNADGEV EARKIMQISW SGDHRVIDGG TIARFCNLWK QYLEEPHEML
LAMQ
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