| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2311 |
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| Symbol | |
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| ID | 5612070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2801807 |
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| End bp | 2803645 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640933221 |
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| Product | acid phosphatase |
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| Protein accession | YP_001474048 |
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| Protein GI | 157375448 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000317657 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000195822 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGCTA AACCCTCATT TATAAAAAGA ATATCCCTAC TGATTTGGAA TACCTTAAAT
GGGATCCGTA AGCTGATCCT TAATATTTTC TTCTTTGGTA TTCTTGCGGC GATCATAGTC
GCGATGACAG TTGAAGATGA TGTAAAACTT GATTCCGGCT CGGCCTTAGT GCTGAACCTA
TCCGGCTCTG TCGTTGAACA GAAAAGGCAA GTCGATCCCA TCGAAGCCGC CATGAAAAGC
AGCAAGAGCA AGGACGCCAG TGGTGAACTG TTACTTGCTG ATGTCCTCAA TGTTATCGAT
AACGCGGCTC TGGACACACG GATCTCATCG ATCGTACTGG ATATTGGTCA CCTGAGGTGG
ACCGGGATCA GTAAACTTCA ATCGATTGGT GACGCACTAA CCCGCTTCAA AGAGTCGGGA
AAACCTATCA TAGCCAAGGC CAATTGGTAC GGTCAGAACC AATATTTTCT TGCCAGCTTT
GCCGACACTA TCTATCTAAA CCCTCAAGGT AGTGTCGAAC TGGAAGGATT GAGTCGCTAT
CGCCAATATT ATAAGTCGGC GTTAGAGAAA CTGAAGATTA AGGCGCATAT CTTCCGTGTC
GGTACCTTCA AATCTGCCGT CGAGCCCTAT ATTCGTGACG ATATGTCACC CGCAGCCAAA
GAGGCCAACA CCGAACTGCT TAACGATATC TGGGCAAATT ATGAAACTCA AGTCGCCGAG
AATCGGAATA TTTCAGCCGA CAAGCTCGTT CTCAGTGCCG ATCAGTATCT TATTGAATTA
GAGAGAGCCA ACGGCAAGTC TGCCGAGATG GCGCTGAATA TGAACTGGGT AGATGAGCTG
GCATCGGCCG AGGCATTCAG ACTCAAGATG ATCGACACTG TGGGTAAAGC CGATGAAGGA
AACAGCTTCA AACAGATCGA CTTTTTCGAT TATCAGTCTT TGATTGCCAC TCACCCCTCC
CTCTTAATCG AGGATACGGT GGGTATTATT GTCGCGAAGG GAACCATATT GAATGGTAAT
CAACCTGCCG GACAAATTGG TGGCGAGAGC ACATCAAAGC TGCTGCGTAA GGCTCGTTTC
GATGAGCAGG TTAAAGCCGT CGTATTAAGG GTCGATAGCC CGGGCGGAAG CGCATTTGCC
TCGGAGCAGA TAAGACAAGA GGTACTTGCA CTCAAAACTG CAGGTAAACC TGTTGTAGTC
AGCATGGGTA GCTATGCCGC GTCAGGCGGT TACTGGATCT CGGCCAGTGC CGATTATATC
TATGCAACGC CTACCACACT TACCGGGTCA ATCGGTATCT TTGGCATGGT GACAACATTC
GAAGACTCGT TATCCAGCAT AGGTATACAC ACAGACGGTG TTGCCACCTC AGATTGGGCG
GGAATATCGG TTACAAAAGG TCTCACTCCC GAGATCAAAT CGGTCATTCA ACGTCATATA
GAACGTGGCT ATCATGACTT TATCTCGCTG GTTGCGACTG AACGTGGCAT GAGCCTTGAT
GATGTCGACA ATATCGCTCA GGGGCGCGTG TGGTCAGGTA AGAAAGCCGT CGAGCTAGGC
TTAGTCGATG AACTTGGCGA TCTGGACAGC GCCGTAGCGA AAGCCGCTAA GATGGCAAAC
CTTGAAGACT TCGACAGTCA GATAATCGAG CAGGAGCTAA GCCCACAGGA GCTCTTCATC
CAGGAGATGT TCGCTTCGGC CGCGGCCTAC TTGCCACAGT CGTCAACGAG TACTGTATTA
GAACAGTTGC TTTCTCAGTG GTCTGGTGTA ATTGAAGAGT TCAGTTCATT CGACGACCCT
AACGGCATGT ATCTCTACTG CGATACCTGT AACTTCTAG
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| Protein sequence | MSAKPSFIKR ISLLIWNTLN GIRKLILNIF FFGILAAIIV AMTVEDDVKL DSGSALVLNL
SGSVVEQKRQ VDPIEAAMKS SKSKDASGEL LLADVLNVID NAALDTRISS IVLDIGHLRW
TGISKLQSIG DALTRFKESG KPIIAKANWY GQNQYFLASF ADTIYLNPQG SVELEGLSRY
RQYYKSALEK LKIKAHIFRV GTFKSAVEPY IRDDMSPAAK EANTELLNDI WANYETQVAE
NRNISADKLV LSADQYLIEL ERANGKSAEM ALNMNWVDEL ASAEAFRLKM IDTVGKADEG
NSFKQIDFFD YQSLIATHPS LLIEDTVGII VAKGTILNGN QPAGQIGGES TSKLLRKARF
DEQVKAVVLR VDSPGGSAFA SEQIRQEVLA LKTAGKPVVV SMGSYAASGG YWISASADYI
YATPTTLTGS IGIFGMVTTF EDSLSSIGIH TDGVATSDWA GISVTKGLTP EIKSVIQRHI
ERGYHDFISL VATERGMSLD DVDNIAQGRV WSGKKAVELG LVDELGDLDS AVAKAAKMAN
LEDFDSQIIE QELSPQELFI QEMFASAAAY LPQSSTSTVL EQLLSQWSGV IEEFSSFDDP
NGMYLYCDTC NF
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