| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2300 |
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| Symbol | |
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| ID | 5611066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2784568 |
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| End bp | 2785848 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640933210 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_001474037 |
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| Protein GI | 157375437 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000680764 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000305682 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCAGC TACGTCTTGA GCCAATCAAC AAGGTTCAGG GGACCATCAA TATCCCTGGA
TCGAAAAGTA TCTCTAACCG CGCGCTTTTG CTTGCTACAC TTGCGAAAGG CACCACGACA
CTGACCAATT TACTCGACTC CGATGATATC CGTTATATGT TGGCGTCGTT GAAACAGCTT
GGCGTAAATT ATCGTCTATC GAATGACAAT ACCGTTTGTG AGCTTGAGGG AATAGGGGCG
CCACTCAATA GTGAGCAAGC CCAAACCCTT TTTCTTGGTA ATGCAGGCAC CGCAATGCGT
CCCTTGTGTG CAGCGTTAAC GCTGGGACAC GGCGAGTTTA CCTTAACGGG CGAGCCTCGA
ATGGAAGAAC GGCCTATTGG TGATCTCGTC GATGCGTTGA GACAGCTTGG GGCCAATGTT
ACCTACCTTA AGAATGATGG CTTCCCGCCT TTAACCATTA ATGCGACCGG ACTCGATGCG
GGTGAAGTTG AGATCGCAGG TGACCTTTCC AGCCAATTTT TAACCGCATT ACTTATGGTT
GCGCCATTGG CGACTGGCGA CGTTAATATC AAGATAAAAG GGGAGCTGGT TTCTAAGCCC
TATATCGATA TTACCATCGC GTTGATGGCT CAGTTTGGTG TGCAAGTGGT TAACCACAGT
TATGAACGTT TTGAGATAAA AGCCGGACAA GGCTACGTCT CACCGGGTAA GGTCCTGGTA
GAAGGGGATG CGTCATCGGC CTCTTACTTC TTAGCGGCTG GTGCGATTAA AGGTGGTGAA
GTAAAAGTCA CCGGAGTTGG GCGCATGAGT ATTCAAGGTG ATGTGAAGTT TGCCGATGTC
TTAGAAAAAA TGGGCGCCGA TATCGAGTGG GGGGATGACT ACATCATTTC ACGGGGTTCG
ACACTCAAGG CTGTTGATCT CGATATGAAT CATATTCCCG ATGCGGCCAT GACTATTGCA
ACGGCAGCTC TGTTTGCAAC CGGCACGACC CATATTCGCA ACATCTATAA TTGGCGTATA
AAAGAGACTG ACAGACTCGC TGCGATGGCA ACCGAACTTC GTAAAGTCGG TGCGATTGTC
GACGAGGGAC ATGATTATAT CAGTATTACT CCACCAACTA AGCCACACAC GGCAGATATA
GATACGTATA ACGATCATCG AATGGCGATG TGTTTCTCTA TGCTGGCGTT TGCAGATTGT
GGGATCACGA TTAACGATCC AGATTGTACA TCTAAAACCT TCCCTGATTA CTTTAATCAG
TTTGCTGCAT TAGCGCAGTA G
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| Protein sequence | MKQLRLEPIN KVQGTINIPG SKSISNRALL LATLAKGTTT LTNLLDSDDI RYMLASLKQL
GVNYRLSNDN TVCELEGIGA PLNSEQAQTL FLGNAGTAMR PLCAALTLGH GEFTLTGEPR
MEERPIGDLV DALRQLGANV TYLKNDGFPP LTINATGLDA GEVEIAGDLS SQFLTALLMV
APLATGDVNI KIKGELVSKP YIDITIALMA QFGVQVVNHS YERFEIKAGQ GYVSPGKVLV
EGDASSASYF LAAGAIKGGE VKVTGVGRMS IQGDVKFADV LEKMGADIEW GDDYIISRGS
TLKAVDLDMN HIPDAAMTIA TAALFATGTT HIRNIYNWRI KETDRLAAMA TELRKVGAIV
DEGHDYISIT PPTKPHTADI DTYNDHRMAM CFSMLAFADC GITINDPDCT SKTFPDYFNQ
FAALAQ
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