| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2299 |
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| Symbol | cmk |
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| ID | 5611065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2783587 |
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| End bp | 2784279 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640933209 |
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| Product | cytidylate kinase |
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| Protein accession | YP_001474036 |
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| Protein GI | 157375436 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0283] Cytidylate kinase |
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| TIGRFAM ID | [TIGR00017] cytidylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000399193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000955893 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGTCTGAAC GGGCTCCTGT TGTCACTATT GACGGTCCAA GCGGTGCGGG AAAAGGTACA
ATCAGCCAGT TATTAGCCGA ACGTTTAGGT TGGAAATTAC TGGACAGCGG CGCAATTTAC
CGAGTATTAG CCTTAGCCGC GATCCATCAC AATGTTGAGC TGGATAACGA GGACTCGCTG
AGTTTGTTGG CCGCGCATCT CGATGTGCAG TTCATTACCG GTAACGGGTT ACACGGCATT
AAGGTTGTAC TTGAAGGCGA AGATGTTTCA ATCGATATTC GCAGTCAAGA GTGTTCAAAT
GCCGCTTCTA AAGTGGCTGC TTATCCACGC GTAAGGGAAG CTTTGTTGCG CCGTCAACGT
GCATTCAATG AAGCGCCTGG TTTAATTGCC GATGGTCGTG ACATGGGAAC GGTTGTTTTC
CCCAACACCC CTGCTAAAAT TTATTTAACC GCATCTGCTG AAGAAAGGGC GCAAAGACGC
TATAATCAGT TGCAGGACAA GGGCTTCGAT GTTAATATCG ACCGTCTTTT GTCCGAGATA
ATAGAACGTG ACGACCGCGA TACCAATCGC AGTGTTGCTC CTTTGGTACC TGCCGAGGAT
GCTTTGATCA TCGACACGTC TGGAATCGGG ATTGATGAAG TGCTCGATAT TGCGTTGACG
CACATACAAA CTAAATTACC AAGTGTGAGC TAA
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| Protein sequence | MSERAPVVTI DGPSGAGKGT ISQLLAERLG WKLLDSGAIY RVLALAAIHH NVELDNEDSL
SLLAAHLDVQ FITGNGLHGI KVVLEGEDVS IDIRSQECSN AASKVAAYPR VREALLRRQR
AFNEAPGLIA DGRDMGTVVF PNTPAKIYLT ASAEERAQRR YNQLQDKGFD VNIDRLLSEI
IERDDRDTNR SVAPLVPAED ALIIDTSGIG IDEVLDIALT HIQTKLPSVS
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