Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2268 |
Symbol | |
ID | 5611777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 2741100 |
End bp | 2742089 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640933178 |
Product | ADP-ribosylation/crystallin J1 |
Protein accession | YP_001474005 |
Protein GI | 157375405 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1397] ADP-ribosylglycohydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.415258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAATCAGA AATCTATCTC ATTAGTTGAA CGTGCAAAAG GTGCATTGCT TGGTCTTGCC TTAGGCGATG CCTTGGGTAC GACATTGGAG TTCAGACCAA AAGATTCTTA TCAACACCTT ACCGATATGA TTGGTGGCGG CCCCTTTAGA CTAAAACCGG GTCAGTGGAC CGATGATACT GCCATGATGC TCTGTCTCGC AGATAGTTTT ATTCACACTG GCAAGAATGA TATTCAGGAT CAGGTGGCGC GGTATTGGTC CTGGTACCAG GATGGTCTTA ACTCATGTAC GGCTGAGTGC TTCGATATCG GTAATACAGT AAAAAATGCA TTAATCTCGT ATCAGAATGA TGGTAATGCC ATGGCTGGCA GCAGATCACA ATACAGCGCC GGAAATGGTA GCTTAATGCG AATTGCGCCA GTTGCACTCA TGTATCACAG TGCCTCTATA ACCGATGCGA TGACCGCAGC ATGGTTTAGT GGTGCTACAA CACACGGCGA ACCCAGATGT ATTCAAGCTT GCCAGCTAAT GACATTTTAT ATTCACAAGC TTCTCAATAG CGAAAGCCAA CCTCCTAAAG ATGAACTTTT TGAATTGCCA TTTTTTCTGC TTGACACGAT TTCAAGTGAA TGGTCAGAAG AGATTAAATA TATTGCCCTG GGTGAATACA AGAACAAATC ACGTCAACAA ATTAAAGGCA CGGGTTTCGT CGTAGAGTCA CTTGAGGCTG CGCTTTGGTG CTTTTATCAG ACTAATGACT TCGAGTCGGG CGCATTACTT GCCGCAAATT TAGGTGACGA TGCTGACACC ACCGCCGCGA TTTACGGTCA ACTGGCAGGT GCCTATTATG GTTTATCAGG GTTGCCGGCT AACTGGCTGA ACAAATTGGC CTGGAAAGAG ACAATAGAAG AGAAAGCTGC ACTGCTAATC ACAACCCCTA TGTTGGCCCA TGAGTATACG AACTTTAGTT TACTAAAACA TGAGATCTGA
|
Protein sequence | MNQKSISLVE RAKGALLGLA LGDALGTTLE FRPKDSYQHL TDMIGGGPFR LKPGQWTDDT AMMLCLADSF IHTGKNDIQD QVARYWSWYQ DGLNSCTAEC FDIGNTVKNA LISYQNDGNA MAGSRSQYSA GNGSLMRIAP VALMYHSASI TDAMTAAWFS GATTHGEPRC IQACQLMTFY IHKLLNSESQ PPKDELFELP FFLLDTISSE WSEEIKYIAL GEYKNKSRQQ IKGTGFVVES LEAALWCFYQ TNDFESGALL AANLGDDADT TAAIYGQLAG AYYGLSGLPA NWLNKLAWKE TIEEKAALLI TTPMLAHEYT NFSLLKHEI
|
| |