| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2219 |
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| Symbol | |
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| ID | 5612762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2676331 |
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| End bp | 2677080 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640933123 |
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| Product | fumarate/nitrate reduction transcriptional regulator |
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| Protein accession | YP_001473956 |
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| Protein GI | 157375356 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACA ACAATAAAAG TCGTCGTTCG ACCGTTCCCG GATGCGCCAT TCATTGTCAT
GATTGCAGTA TGGGAACCTT GTGTATTCCT TTTACACTCA ATACCAATGA ACTCGATCGT
CTCGATGAGA TTATTGAAAG AAAAAAGCCT ATCCAAAAAG GTGAGCAGAT ATTCAAGTCT
GGTGACCCTT TAAAATCTCT TTATGCCATT CGTTCAGGAA CCATAAAAAG TTTTACTATT
ACAGAGCAAG GTGACGAGCA GATCACGGGT TTCCATTTGG CTGGTGACGT GATTGGTTTT
GACGGTATCC ACGCTCAGGA ACACCAAAGC TTTGCCCAAG CCCTTGAGAC CTCGATGGTT
TGTGAAATTC CTTATACGAC TCTAGATGAT CTCAGTGGCA CTATGCCAAA GCTAAGACAA
CAGATCATGC GCTTAATGAG CAATGAGATC CAAAGCGATC AGGAGATGAT TCTGCTGCTC
AGTAAAAAGA ATGCTGAAGA GAGACTCGCC GCATTTATCA GTAACCTGGC TACCCGTTTT
GGCAATCGTG GCTTTTCTCC AAAAGAGTTC AGACTAACCA TGACTCGTGG TGACATAGGT
AACTATTTAG GGCTTACGGT TGAAACGATT AGCCGCCTGC TTGGCCGCTT CCAAAAAGCC
GATCTGATCG AAGTTAAGGG TAAGTATATT ACTATCGTTA ACTTTGAAGC GCTTAATACC
CTTGCAGGTA ATACCGCGAT TGCAAGATAA
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| Protein sequence | MTDNNKSRRS TVPGCAIHCH DCSMGTLCIP FTLNTNELDR LDEIIERKKP IQKGEQIFKS
GDPLKSLYAI RSGTIKSFTI TEQGDEQITG FHLAGDVIGF DGIHAQEHQS FAQALETSMV
CEIPYTTLDD LSGTMPKLRQ QIMRLMSNEI QSDQEMILLL SKKNAEERLA AFISNLATRF
GNRGFSPKEF RLTMTRGDIG NYLGLTVETI SRLLGRFQKA DLIEVKGKYI TIVNFEALNT
LAGNTAIAR
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