| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2217 |
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| Symbol | |
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| ID | 5612874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2675401 |
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| End bp | 2675586 |
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| Gene Length | 186 bp |
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| Protein Length | 61 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640933121 |
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| Product | cytochrome oxidase maturation protein, cbb3-type |
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| Protein accession | YP_001473954 |
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| Protein GI | 157375354 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3197] Uncharacterized protein, possibly involved in nitrogen fixation |
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| TIGRFAM ID | [TIGR00847] cytochrome oxidase maturation protein, cbb3-type |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTATCA TCTATGTGTT GATCCCGATA GCCATGTTAT TTGTTCTTAT CGCGATTGGG
ATCTTTTTTT GGGCTGTAAA ATCTGAACAG TTCGATGATC TTGACAGGCA GAGTGTATCA
ATCCTATTTG ACGAAGATGA AAAACCGACT CCAAAAGCTA ACGATAATGA GTCAACGCCC
TCTTGA
|
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| Protein sequence | MSIIYVLIPI AMLFVLIAIG IFFWAVKSEQ FDDLDRQSVS ILFDEDEKPT PKANDNESTP
S
|
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| |