Gene Ssed_2210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2210 
Symbol 
ID5613147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp2668465 
End bp2668890 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content40% 
IMG OID640933114 
Producthypothetical protein 
Protein accessionYP_001473947 
Protein GI157375347 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.120945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGGAT TATTTTGTTC ATCTTGCTCT CATGATGCTC CCAAAGATGT ATCAAAAACA 
ACCAAAGACA GCTCGCTTTG TGACTTTAAT GCGGGTAAGT GTACTCAATC TGTTGCTGGT
GTTGGATTTG ACCTATTAAT CACCCCCTAC AATTCACCCA GTGAAAGGCC ATTAACCCTA
GAGCTCATCA GCTCTGAACC CGTAAATAAC CTGGCTATGA GGGTTGAGGG AAGAGATATG
TTTATGGGGG TTATTCCGGT TAATTTAACT AAAGTTGATG AAAACCTATA TAATGGTCAG
CTGATATATG GTTCTTGTAG CAGTAATTAT ATGGTGTGGA GAGCCTTTGT TACTTTTAAT
AAGGAAGGTT CTCAGCATAT CGTCATGTTC GACTTTCTTG CCGATAATGA AGAAAGCGAG
CTTTAG
 
Protein sequence
MLGLFCSSCS HDAPKDVSKT TKDSSLCDFN AGKCTQSVAG VGFDLLITPY NSPSERPLTL 
ELISSEPVNN LAMRVEGRDM FMGVIPVNLT KVDENLYNGQ LIYGSCSSNY MVWRAFVTFN
KEGSQHIVMF DFLADNEESE L