| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2163 |
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| Symbol | |
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| ID | 5610004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2614965 |
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| End bp | 2615975 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640933067 |
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| Product | transport system permease protein |
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| Protein accession | YP_001473900 |
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| Protein GI | 157375300 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCTGT TTAACCCTAC ACTGTTACTG GCACTCTTGA TCCCCTTGGC TGTGATATCG
CCCTTGATTG CCATTGTGCT CGGCAGTGCC GACATCAGCC TGGCCGAAGT AATTGGCGCC
ATAGGCCGCA GTGTCACGAC CCTGTTCCAG ACAGAATCAA ACACGTCACT GGCAGATCGC
ATCATCATCG AACTCAGAAT GCCACGGGCC TTGATGGCTA TGGTATGTGG TGCCGGGCTC
GCGGTATCGG GCTCTGTACT TCAAAGCGTA ACCAGAAACC CCCTCGCCGA TCCTTACCTG
TTCGGCATCT CCGCAGGGGC ATCCCTTGGG GCGATTCTGG CACTCACAGG TGGGTTAACC
TTTCTTCCCC TGCCTGTTAG CGCATTTTTA GGCTCCTTGA TTGCCGTCGC CGTTGTGGTG
GTGATGGCAC GGGATGGCCA GGTTGAAACC CTGGTGCTAT CGGGCGTCGC CATCTCCTTC
CTGCTCTCAT CAATTGCCAA CCTTGTTTTG TACTTCGGCG ATCCCCAAGC CATGCAGGCA
GTGCTGTTTT GGTCTCTTGG CAGCTTCAGC CGTGCCACCT GGAGCACACT CATGGTACCT
GGCTTTATTG TGATCATTGC CACTGTGATT ATTTACCAAT TTCAGCGCCC ATTGCAGGCA
CTGATGGCCG GCGACGAGAG CGCTCATACT CAGGGCGTTG CAGTTCTCCC CCTGCGTTTA
GGCATGTTAA TTCTTACAGC CCTGATGACC TCATCATTAG TGGCGGCCTG CGGTGGTATC
GGATTTGTCG GACTGATGGT ACCTCATATC GTCCGCATGC TTATCGGTTC AGCAAGTTCA
AGTTCTCTCA TTGCCACGGC TTTGCTCGGT GGCGTACTCA TGGTGTGGGT CGATCTGTTG
GCCAGACTGA TCCTGCCGGC ACAGGAACTT CCTGTCGGTG TGATGACCGC CATGCTGGGT
AGTGTCTTTT TCATCGGTTT GTTGGTTAAG CGTAAACAGG GGCATAGATA G
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| Protein sequence | MRLFNPTLLL ALLIPLAVIS PLIAIVLGSA DISLAEVIGA IGRSVTTLFQ TESNTSLADR
IIIELRMPRA LMAMVCGAGL AVSGSVLQSV TRNPLADPYL FGISAGASLG AILALTGGLT
FLPLPVSAFL GSLIAVAVVV VMARDGQVET LVLSGVAISF LLSSIANLVL YFGDPQAMQA
VLFWSLGSFS RATWSTLMVP GFIVIIATVI IYQFQRPLQA LMAGDESAHT QGVAVLPLRL
GMLILTALMT SSLVAACGGI GFVGLMVPHI VRMLIGSASS SSLIATALLG GVLMVWVDLL
ARLILPAQEL PVGVMTAMLG SVFFIGLLVK RKQGHR
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